PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH04804.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

Dof

Protein Properties

Length: 697aa MW: 69671.1 Da PI: 7.3348

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH04804.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	101.1	7e-32	94	152	3	61
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 e + +cprC s +tkfCyynny+++qPr++CkaC ryWt GG+lrn+ G+grrk+k++ PNH04804.1 94 EGKASCPRCSSLETKFCYYNNYNIKQPRFYCKACARYWTSGGTLRNIAPGSGRRKSKAA 152 56789***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 697 aa Download sequence
MDDSDSRDTH STGQLDNWAE GVAEDLDADA KGRGGTSASN RRGASPAPDD NNNGATSMSK 60 RPRPAPQRDS SPDSANPLEE ERDSKGRVKL PRPEGKASCP RCSSLETKFC YYNNYNIKQP 120 RFYCKACARY WTSGGTLRNI APGSGRRKSK AATQAAKPSS CLADRLPPAA VQPPHVFGGL 180 APSGPAGSYG GLNPALLAAA ADPGGLLANN AAAAAYAHHH LLGHSGMGGL RLPGVAQWPG 240 GGLPPDLDGS GAMMSCHLQA HLGGGAGGAS VLAHQSSITS LDARLLLGHR DELLAQAQAQ 300 AQAQQQQHHQ QQQHQGQQRH GSPSPSPPQQ QQQQQLSSPQ PPASPLAAPQ PCQPHAQRYG 360 SPSDEAEGAD DGSSAQARRV RARLDAADGG ASAPASAALG LEHGLGGAVS LSCAQLAGLS 420 MPPSMASLAA VMGPGGGPSC MPPLLPHPDD ASAAGFLEAH AASLARHHLQ AVLQQGGQPL 480 GPGMALHHHH HLLAGLAQQQ QQQQQLPGGG GGGLGLPGGG SAAAAMAALG LLHPSGLGDV 540 GSWLQGMGGG GHPMSVAALD ALHAGLMQQQ QQLPSAAEVA AADWLSMASG GGAKGQGAAA 600 MNAMAAAQAA GMGALGFGMG GSSAAAQMYH AQAAAAAAAS SGGSGGWPGG PGDASLAGSG 660 PSPYWSGLWT SYNSPPPSNY AGYALQAAAA AAYPGVR

Sequence ? help Back to Top

Protein Sequence Length: 697 aa Download sequence

MDDSDSRDTH STGQLDNWAE GVAEDLDADA KGRGGTSASN RRGASPAPDD NNNGATSMSK  60
RPRPAPQRDS SPDSANPLEE ERDSKGRVKL PRPEGKASCP RCSSLETKFC YYNNYNIKQP  120
RFYCKACARY WTSGGTLRNI APGSGRRKSK AATQAAKPSS CLADRLPPAA VQPPHVFGGL  180
APSGPAGSYG GLNPALLAAA ADPGGLLANN AAAAAYAHHH LLGHSGMGGL RLPGVAQWPG  240
GGLPPDLDGS GAMMSCHLQA HLGGGAGGAS VLAHQSSITS LDARLLLGHR DELLAQAQAQ  300
AQAQQQQHHQ QQQHQGQQRH GSPSPSPPQQ QQQQQLSSPQ PPASPLAAPQ PCQPHAQRYG  360
SPSDEAEGAD DGSSAQARRV RARLDAADGG ASAPASAALG LEHGLGGAVS LSCAQLAGLS  420
MPPSMASLAA VMGPGGGPSC MPPLLPHPDD ASAAGFLEAH AASLARHHLQ AVLQQGGQPL  480
GPGMALHHHH HLLAGLAQQQ QQQQQLPGGG GGGLGLPGGG SAAAAMAALG LLHPSGLGDV  540
GSWLQGMGGG GHPMSVAALD ALHAGLMQQQ QQLPSAAEVA AADWLSMASG GGAKGQGAAA  600
MNAMAAAQAA GMGALGFGMG GSSAAAQMYH AQAAAAAAAS SGGSGGWPGG PGDASLAGSG  660
PSPYWSGLWT SYNSPPPSNY AGYALQAAAA AAYPGVR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	60	64	KRPRP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G34140.1	1e-25	Dof family protein