PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH04773.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

C3H

Protein Properties

Length: 345aa MW: 34345.2 Da PI: 6.7564

Description

C3H family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH04773.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-CCCH	31.8	2.4e-10	63	82	6	25
-SGGGGTS--TTTTT-SS-S CS zf-CCCH 6 CrffartGtCkyGdrCkFaH 25 Cr+f++tG C+yG+rC+F+H PNH04773.1 63 CRTFSATGACQYGNRCRFIH 82 ******************** PP

Sequence ? help Back to Top
Protein Sequence Length: 345 aa Download sequence
MQRQVDRCED GRQFPFLARE VTNCEIGFTL KPGSASVGFL ITLASSLPCA VATSCTPRCA 60 MHCRTFSATG ACQYGNRCRF IHAAPPGSAF GTPRPLGPGF CSPERAGSLG DEEYECDRDA 120 SPAGVAGGAE GLWSRGAEGG GVQGMLPAAA ASLLSPIRGS ASLFSASLGA RAGARHMLSS 180 PPYKLQRTAH LPTTAATAAD SAGGTDGGGG VEGARGGVDT SVRLLNGGGA AAARGLHGAG 240 SLDAALQLFS AFGGGQAAAA SGTATAMGSP PPRPKQPRSG SEEAPAAWAV AGGGGAGVQE 300 IPQPQRQQPQ PQPQPQQGPH SGVDAVMAER EVTGGATEEG EVAAV

Sequence ? help Back to Top

Protein Sequence Length: 345 aa Download sequence

MQRQVDRCED GRQFPFLARE VTNCEIGFTL KPGSASVGFL ITLASSLPCA VATSCTPRCA  60
MHCRTFSATG ACQYGNRCRF IHAAPPGSAF GTPRPLGPGF CSPERAGSLG DEEYECDRDA  120
SPAGVAGGAE GLWSRGAEGG GVQGMLPAAA ASLLSPIRGS ASLFSASLGA RAGARHMLSS  180
PPYKLQRTAH LPTTAATAAD SAGGTDGGGG VEGARGGVDT SVRLLNGGGA AAARGLHGAG  240
SLDAALQLFS AFGGGQAAAA SGTATAMGSP PPRPKQPRSG SEEAPAAWAV AGGGGAGVQE  300
IPQPQRQQPQ PQPQPQQGPH SGVDAVMAER EVTGGATEEG EVAAV