PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH04560.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | ERF | ||||||||
Protein Properties | Length: 236aa MW: 26058.9 Da PI: 7.6404 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.4 | 1.8e-18 | 110 | 160 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56 gy+GVr+++ +g+++AeIrd + kr ++g+f +a eAa+a+++a+++l+g+ PNH04560.1 110 GYRGVRRRP-WGSYAAEIRDsT-----CgKRRWIGTFKSAVEAARAYDEAALALHGP 160 8********.**********44.....57**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 236 aa Download sequence |
MATAALVELV PDALPRGCSS RSHGTDEKPN SARSAREARM VDIYIPLHFP SGAFYSSEEE 60 HSDSLAPLTL TLGKRARDAD PDWEADQDAN GAAAGPNSTP HEAHANNKQG YRGVRRRPWG 120 SYAAEIRDST CGKRRWIGTF KSAVEAARAY DEAALALHGP RAKTNFVYDC QNRKPAPPHV 180 THRRKSDDSD CSLTAALPLA EYVAIEQQQQ QQQERPRLDA LLQVAHLFGV RDFRMA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G12980.1 | 1e-14 | ERF family protein |