PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH04309.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | MYB | ||||||||
Protein Properties | Length: 198aa MW: 22665.5 Da PI: 10.3562 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 63.6 | 4e-20 | 1 | 45 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+WT+eEd +l ++v+ +G ++W++Ia+ ++ gRt+k+c++rw++ PNH04309.1 1 GPWTPEEDNILRQLVTTHGARNWTRIAEVIP-GRTGKSCRLRWLNQ 45 79*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 46.9 | 6.1e-15 | 53 | 97 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g++T eEd ++ a+ ++G++ W++Ia++++ gRt++++k+rw +++ PNH04309.1 53 GPFTIEEDAVILWAHSLYGNK-WASIAKHLP-GRTDNNIKNRWDQWR 97 79*******************.*********.***********8886 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
GPWTPEEDNI LRQLVTTHGA RNWTRIAEVI PGRTGKSCRL RWLNQLSPVV KCGPFTIEED 60 AVILWAHSLY GNKWASIAKH LPGRTDNNIK NRWDQWRLAA HLRAQAAILM QRAAFNLATE 120 NTNNTNPQQQ QQQQQQQQQQ QQQQQQMQQQ MQQQQMQQQQ MQQQQMQQQQ QLNSLGGSGI 180 DPQVLAQILL LSSGAGMG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 1e-38 | MYB family protein |