PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH04238.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | MYB | ||||||||
Protein Properties | Length: 145aa MW: 16245 Da PI: 8.5052 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 43.8 | 6e-14 | 46 | 95 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqk 46 ++W +eE ++lv +v+ lG + +W+ +ar++g gRt+kq+++++ + PNH04238.1 46 QPWFEEETQRLVALVASLGEEgnlcasDWSEVARRLG-GRTPKQVREKFKN 95 69******************9****************.**********986 PP | |||||||
2 | Myb_DNA-binding | 28.4 | 3.7e-09 | 104 | 145 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 + +WT E+ l+ a+ ++ ++ W+ +a++++ +R ++ +k+rw PNH04238.1 104 KEAWTMKEENVLALAHLRHRNR-WADVAQYLP-KRFENTIKNRW 145 579*******************.*********.*********** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 145 aa Download sequence |
MSDTGDDDDT GSDASPLRIP TWPGGGGDAG AADAGTRKRG TSKQVQPWFE EETQRLVALV 60 ASLGEEGNLC ASDWSEVARR LGGRTPKQVR EKFKNDLRPG IQNKEAWTMK EENVLALAHL 120 RHRNRWADVA QYLPKRFENT IKNRW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G11510.2 | 2e-21 | MYB family protein |