PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PNH04233.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 145aa MW: 16207 Da PI: 9.1514 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.2 | 5.1e-15 | 46 | 95 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqk 46 ++W +eE ++lv +v+ lGg+ +W+ Iar++g gRt+kq+++++ + PNH04233.1 46 QPWFEEETQRLVALVQSLGGEgnlcasDWSEIARRLG-GRTPKQVREKFKN 95 69***********************************.**********986 PP | |||||||
2 | Myb_DNA-binding | 33.3 | 1.1e-10 | 104 | 145 | 1 | 44 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 + +WT E+ l+ a+ ++ ++ W+ +a++++ +R+++ +k+rw PNH04233.1 104 KEAWTMKEEYVLALAHSRHRNR-WADVAQYLP-KRSENTIKNRW 145 579*******************.*********.*********** PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 145 aa Download sequence |
MSDTGDDDDT GSDASPLRIP TWPGGGGDAG AADAGTRKRG TSKQVQPWFE EETQRLVALV 60 QSLGGEGNLC ASDWSEIARR LGGRTPKQVR EKFKNDLRPG IQNKEAWTMK EEYVLALAHS 120 RHRNRWADVA QYLPKRSENT IKNRW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G09370.1 | 1e-22 | MYB family protein |