PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH04047.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family AP2
Protein Properties Length: 163aa    MW: 17202.7 Da    PI: 4.6901
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH04047.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP236.21.5e-113075555
         AP2  5 GVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                GV++d ++grW A I +       +++slg f t+e Aa+++++++++++g
  PNH04047.1 30 GVCFDWTTGRWQAGIAVL-----GRSVSLGAFATEESAARQYDKCALRIRG 75
                9****************3.....4*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MNLLPAVRPD SSFSIGSSGP QMPGACSAGG VCFDWTTGRW QAGIAVLGRS VSLGAFATEE  60
SAARQYDKCA LRIRGFQAWL NFPLGDYVEE ADGSLVLDLR VDPAALEIVR HCLARINTAH  120
PQPLQAAAEL LGAGGYMRLM ALISEAAAVL ASADEMREPP PMG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G39250.12e-13AP2 family protein