PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH03968.1
Organism
Tetrabaena socialis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family MYB_related
Protein Properties Length: 321aa    MW: 33500.9 Da    PI: 8.1554
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH03968.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.32e-145398247
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     ++WT+eE+ +++++ k+lG g+W+ I++ +   Rt+ q+ s+ qk+
       PNH03968.1 53 QPWTEEEHRQFLQGLKKLGRGNWRQISKSFLPSRTPTQVASHAQKH 98
                     79**************************9999************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MSPPAAFVSY SALEAAAGTL LAIMGSSDHS SGPENSDDNH NSSDAANASR KGQPWTEEEH  60
RQFLQGLKKL GRGNWRQISK SFLPSRTPTQ VASHAQKHFM RVAGATKRKS RFTALEPAEP  120
AQDTKQPPEQ QQQEQHMAAQ QQMMAASMPF PFMHPMMFGF PGPFFPPFMC PPPAFLSAMQ  180
KQGAMPMMMP SPMFPMAAMA ALNPAMNFFM AQQMAAAQQM AAAAHATAAA TSGGATTAAT  240
AAAATADTAN FDQAAEPRPH SAPGSLGVCK PEAQHAKPAV AGGSRGAAGV AAANSEDGLG  300
VCKPEAQHAK PAVAGGSRDE A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61620.19e-25MYB_related family protein