PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH03891.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

GATA

Protein Properties

Length: 1395aa MW: 146516 Da PI: 9.6005

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH03891.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	36.8	5.5e-12	771	804	1	34
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 CsnCgt +TplWR++ t+CnaCG+y + +g PNH03891.1 771 CSNCGTAHTPLWRKDRATGLTVCNACGIYKQTHG 804 **************77777******99886 PP

Sequence ? help Back to Top
Protein Sequence Length: 1395 aa Download sequence
MASRKRPDPM EDAQVLPLAC AKTPRLHFSG GVRLHLAQHP RTSQMRPSPE ARDCAGPADR 60 PTWTVHALPA HPSAVAQPGT RGGTAAGQQP AQADRHGLPG RAATGLQQGI YSDAGGQVET 120 QQEALEPPPW GSGEYGGQRC TITGARSGLQ ERGSTAARDG MLGSPSGAGD EAPHKDKLQQ 180 LRLQQLRMEL LNQLLQQQRQ HHQQQRHEQQ QQAADLAAMA PPPFQGPQQH QRPSQLQQHL 240 ARLALQVQLE NGHGHKAAGA SGQGQWAEGR WVQVASPRLQ PASDAADASP PERAWHGAGV 300 LQLPSRGPHA PVGGHHELRH PLPPAHPQQQ AQQQAQQQQA PPLAASTQWL VPLSPSTGPP 360 LRVLQQQPPH HQQQQTALPL QGLTPCGNGC KAEQQCEEPL AADRDLSVDE DARTVAAVLV 420 RILHSRAPQD GVSGGPGSKS LEGMAVCEEL ANVAGQCSAY NSGQEEEGRG TRVASDWWAM 480 EEAPLPDVEV LELHAAEDGM VSAGNGLFLT PTSTGPGISF RQLVGEQADH PFPDLPRRPR 540 TRPAWPLKPL SVNHSARLRA IANSGPAARR LPRRHPRAAM GRAACPSGAQ PPPLLATMAD 600 PAATTAAAGG PAASPPEHQP PEPPAVPERL ACAVAATVDV AASATEPLGA AAGGGAERAG 660 APQPLLRKQS LPSEPREPSP AAPAAAATAR SGAPAPAPLH APAAGHTYRG VDTGGASAAA 720 PPCSRPVLTA AARQPPNPHG SATAPPGGPP PSSRPPPAPR PPRNHLGPLL CSNCGTAHTP 780 LWRKDRATGL TVCNACGIYK QTHGCERPVD RWNEGPQPTR RSGPAPRAAA PAAASSPPPP 840 PQYVPVARQG GRGHAPDGAP HPQLARLQAG ADAGGLPAGL RWAGEAREGG PAQQQEQQRA 900 RRAADGGPPF QQRAWDQQLG AQQGVGWGRD PADGGAAGSP RSREHPPPPD GDRRRGRPTS 960 PKPRSGRGGG AVAGPRGGAG GAEARAGGGG GEGAALQQSR NGGDGGPAAA GLQLAGGRRA 1020 RDEQYDTAEL PPPRRVAREG RGAGGEQPAP QRMPRDEWAQ RAHELVGLMG LDDGGAALRP 1080 QLQEAGGARF VQLSQGQVEY LPVARSVRSS RQARDDSGLY DMALGAGSRR EPAGEERPWP 1140 RQQQASAGPA SPRELIAEVL GGADGDSNRL LLQHLINQVR QRRQQMMPEL PYEQQQAQHR 1200 PLDSPDRGPV DGWRGDPWPQ ADARPHRLRE QAASAAAAPG AGSSLLLQQL MQRLHQQQQQ 1260 QQGDEEFYRD RHQQPLTQPS QRNEQPAQHD RRPRGPARGE AALLPYPGKH APLSAGSPGG 1320 NGSSGPRQQG RYGSDSRAPS VVVNLELLAL QLEQQQQQGL LGQQAMSLRD FQAAGMFAQQ 1380 GGNAGGGRGQ RQYNV

Sequence ? help Back to Top

Protein Sequence Length: 1395 aa Download sequence

MASRKRPDPM EDAQVLPLAC AKTPRLHFSG GVRLHLAQHP RTSQMRPSPE ARDCAGPADR  60
PTWTVHALPA HPSAVAQPGT RGGTAAGQQP AQADRHGLPG RAATGLQQGI YSDAGGQVET  120
QQEALEPPPW GSGEYGGQRC TITGARSGLQ ERGSTAARDG MLGSPSGAGD EAPHKDKLQQ  180
LRLQQLRMEL LNQLLQQQRQ HHQQQRHEQQ QQAADLAAMA PPPFQGPQQH QRPSQLQQHL  240
ARLALQVQLE NGHGHKAAGA SGQGQWAEGR WVQVASPRLQ PASDAADASP PERAWHGAGV  300
LQLPSRGPHA PVGGHHELRH PLPPAHPQQQ AQQQAQQQQA PPLAASTQWL VPLSPSTGPP  360
LRVLQQQPPH HQQQQTALPL QGLTPCGNGC KAEQQCEEPL AADRDLSVDE DARTVAAVLV  420
RILHSRAPQD GVSGGPGSKS LEGMAVCEEL ANVAGQCSAY NSGQEEEGRG TRVASDWWAM  480
EEAPLPDVEV LELHAAEDGM VSAGNGLFLT PTSTGPGISF RQLVGEQADH PFPDLPRRPR  540
TRPAWPLKPL SVNHSARLRA IANSGPAARR LPRRHPRAAM GRAACPSGAQ PPPLLATMAD  600
PAATTAAAGG PAASPPEHQP PEPPAVPERL ACAVAATVDV AASATEPLGA AAGGGAERAG  660
APQPLLRKQS LPSEPREPSP AAPAAAATAR SGAPAPAPLH APAAGHTYRG VDTGGASAAA  720
PPCSRPVLTA AARQPPNPHG SATAPPGGPP PSSRPPPAPR PPRNHLGPLL CSNCGTAHTP  780
LWRKDRATGL TVCNACGIYK QTHGCERPVD RWNEGPQPTR RSGPAPRAAA PAAASSPPPP  840
PQYVPVARQG GRGHAPDGAP HPQLARLQAG ADAGGLPAGL RWAGEAREGG PAQQQEQQRA  900
RRAADGGPPF QQRAWDQQLG AQQGVGWGRD PADGGAAGSP RSREHPPPPD GDRRRGRPTS  960
PKPRSGRGGG AVAGPRGGAG GAEARAGGGG GEGAALQQSR NGGDGGPAAA GLQLAGGRRA  1020
RDEQYDTAEL PPPRRVAREG RGAGGEQPAP QRMPRDEWAQ RAHELVGLMG LDDGGAALRP  1080
QLQEAGGARF VQLSQGQVEY LPVARSVRSS RQARDDSGLY DMALGAGSRR EPAGEERPWP  1140
RQQQASAGPA SPRELIAEVL GGADGDSNRL LLQHLINQVR QRRQQMMPEL PYEQQQAQHR  1200
PLDSPDRGPV DGWRGDPWPQ ADARPHRLRE QAASAAAAPG AGSSLLLQQL MQRLHQQQQQ  1260
QQGDEEFYRD RHQQPLTQPS QRNEQPAQHD RRPRGPARGE AALLPYPGKH APLSAGSPGG  1320
NGSSGPRQQG RYGSDSRAPS VVVNLELLAL QLEQQQQQGL LGQQAMSLRD FQAAGMFAQQ  1380
GGNAGGGRGQ RQYNV