PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH03716.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | SBP | ||||||||
Protein Properties | Length: 138aa MW: 15680.4 Da PI: 8.8387 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 82.7 | 4.8e-26 | 39 | 114 | 1 | 76 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 +Cqv+gC+ +ls k y +r+ vCe+h ka + +++g+e rfCqqC +f +l+ef+ ++rsC r ++ n rrr + PNH03716.1 39 VCQVDGCNRELSGEKAYLQRYSVCEQHFKADASVLHGQEVRFCQQCNKFQDLREFEGARRSCAARSKDRNMRRRLQ 114 6************************************************************************976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MSADFPSGER GTRWRTADYD IDPYTGAVRS LGRASRAAVC QVDGCNRELS GEKAYLQRYS 60 VCEQHFKADA SVLHGQEVRF CQQCNKFQDL REFEGARRSC AARSKDRNMR RRLQTTGQQK 120 GNRAGDQEAT TLPLHFEL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G53160.1 | 3e-19 | SBP family protein |