PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH03499.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family NF-YC
Protein Properties Length: 563aa    MW: 59418.7 Da    PI: 8.5975
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH03499.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC25.33.2e-084385032085
       NF-YC  20 elPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtr 85 
                  lP + +++++ +d+d+++ +aea   ls a ++f+  +  ++   a  +krrt+k  d++ +v  
  PNH03499.1 438 VLPASWVRRVVGVDPDIHRCTAEAVLSLSAAADVFLSAMCAKAAAAAAGSKRRTVKLEDVQHCVRT 503
                 5899********************************************************999865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 563 aa     Download sequence    
MWRFILSAAS SARSEAPAAA GAVRGFAAQA AHNPAVFIDK TTKVICQGFT GKNGTFHSEQ  60
VKVKKAMQEQ TKTRLIGPNC PGIIKPGECK IGIMPGYIHK QGKIGIVSRS GTLTYEAVFQ  120
TTTQGLGQST VVGIGGDPFN GTNFVDCLKQ FVNDPQTEGI IMIGEIGGTA EEEAAEFIRA  180
SGTTKPVVSF IAGGSGAVGG TRMGGSGAGV RVGRDSYQAR DAAAAVEIRK RTQNLRVPPL  240
VPFSRLLMED RACTALPLAL GNYFSLAGCC PFTRLIYPLP ERALAGLGTH LTLDLGGAAR  300
FGPDVEWLEG PGPDPAAAVA VDYQQPQHTA AMAPPSAYML FCSENRASVK ARLQADGREK  360
VPITEVAKEL GQLWKALSDE ERAAYKLQHQ ELQQKEQALK DEQQQQQGET GTAEGSEPQE  420
GGPLHDSGDA KPPSRLDVLP ASWVRRVVGV DPDIHRCTAE AVLSLSAAAD VFLSAMCAKA  480
AAAAAGSKRR TVKLEDVQHC VRTDKRLAAA GFNAVTAMVA AQAAAAAEED KVAQPPGKKA  540
KLDKPEKKGV ANSIQRAFGL VKQ