PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH02761.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family C3H
Protein Properties Length: 649aa    MW: 67360 Da    PI: 7.5245
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH02761.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.43.8e-06100120526
                 --SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   5 lCrffartGtCkyGdrCkFaHg 26 
                 +C +f + G C++Gd+Ck++H+
  PNH02761.1 100 ICFDFTK-GVCSRGDKCKYSHD 120
                 6777888.*************7 PP

2zf-CCCH18.63.3e-06179200426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 ++C +f + G C++G  C+++H+
  PNH02761.1 179 AICYDFVK-GVCQRGVDCRYSHD 200
                 58******.*************7 PP

3zf-CCCH23.21.2e-07219240426
                 ---SGGGGTS--TTTTT-SS-SS CS
     zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                 e C +++r G C++G++Ck++H 
  PNH02761.1 219 EVCYDYLR-GRCNRGATCKYSHN 240
                 78******.*************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 649 aa     Download sequence    
MEQLTQRFDE TSLASSGSSM EAGTLGNGDP LSSGDATAQH SGAASESSSA TENLGCQLDS  60
GCGSGSLEYA QQTRSQHEQQ SRSQHEAHEG LTQQEGKSQI CFDFTKGVCS RGDKCKYSHD  120
LATIVHFNSK EKGICFDYLR NQCHRGLLCR FSHDLSNIAQ QCQVYNNGAK ENKGAKPNAI  180
CYDFVKGVCQ RGVDCRYSHD LSLIARMARG GSAQPKAGEV CYDYLRGRCN RGATCKYSHN  240
IAFLAAPGFL GSDTPADGAP MPAQASGPGM HAGGPPMGGM PLGHGSGGYP VNMGGMHGGM  300
PQRLSPALSA DQATFNHVMA AAGQGAVNQM FAMQQHQHQA NSMAAAEAAE RRRRSGSISG  360
EASNEALSAN DQPPGSWHGM PPALPKNNMG GMAQHHQAAM MNSMAVQQHQ QRMAHMAHQG  420
ANNMHNSHIH GHVPVLGMPG GPGQHHGVEG FGHHHPGGGM SSGMFGKAPG MGHFGGPEQA  480
GHGMRRPPLH PGHMPAEIAA LFGGGMPENP GVFAEALAVA KAQAQAQHQA QNQSARMSNG  540
SMLSSMGSGG GGLPSMSGGG GPAMPQPIPG RDNMLAPHGG EYYAASNASF ASNGPQPGGG  600
VGGGGHPMVE HGHLSRSAPT GGPLHPNNVN PDLLPMIKEI WSKPGAVLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48440.16e-06C3H family protein