PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNH01298.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | MYB | ||||||||
Protein Properties | Length: 660aa MW: 71457.9 Da PI: 5.0987 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47.9 | 3.1e-15 | 33 | 79 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd+ l ++v G +W+tIa+ + gR++k+c++rw ++l PNH01298.1 33 RGPWTPEEDKMLTELVLSCGAQRWSTIAESII-GRSGKSCRLRWWNHL 79 89******************************.***********8886 PP | |||||||
2 | Myb_DNA-binding | 40.8 | 5e-13 | 85 | 129 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+++ Ed +v+ ++++G++ W+ Ia+ ++ gRt++ +k+rw++ PNH01298.1 85 KGPFSDFEDAVIVRSHEKYGNK-WSVIAKLLP-GRTDNAVKNRWNST 129 7899999***************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 660 aa Download sequence |
MTGRKGAERR PRASAKRNSS FLEDECDAQG EKRGPWTPEE DKMLTELVLS CGAQRWSTIA 60 ESIIGRSGKS CRLRWWNHLS PQVKKGPFSD FEDAVIVRSH EKYGNKWSVI AKLLPGRTDN 120 AVKNRWNSTL KRKHTGGSLN NKFIELYPEL DSLMCDPEAA REAAEYTNIL DDTAYGMSAT 180 QQYTGSEEEE HEAEDEEEGH MSDDSEQPPA RRPAARRAVH LRQPSQRHLQ QQQQAPLSWP 240 AAGSESTEDE GALEDPMAAR RQSQQQAQAL SLSPSCSPLS SSDTVQTHHL LQRTHSQPEQ 300 QQAAGCMHWV QHAPQNDASA PLPSCEQPPA KRSRASPHAQ RDTQPPASPP QMPSLSAPCL 360 AAAPAAAACD LLLASSTGCE MYGGAPAVAT SCSGPIPRLV LDPCSSAAHA CAPAPPMQQR 420 QLQQQQQHQQ QALFGAECAM PLCAPPAPAG ALAEPTDDLE WQTIMESLEV AIPTEDNLDA 480 PDDWADVLLQ APQEQAAGAA AGRPPVSSWP CVPPLPMQAP SAALQMQMQM AAQQLQAAPM 540 AQSEQAMQPC KWSAPSLVAA PKRQRAVAGP PQPQPQLAMQ TQLLMPRRSN SDFAGWTFQD 600 FGGLAFPYAG DAGMAFFGQQ LLPQQPAPYA QQQSCFTPSS YDLSRLGCGG AFADPLTFLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G67300.1 | 4e-39 | MYB family protein |