PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PNH01298.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
Family MYB
Protein Properties Length: 660aa    MW: 71457.9 Da    PI: 5.0987
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PNH01298.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding47.93.1e-153379148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEd+ l ++v   G  +W+tIa+ +  gR++k+c++rw ++l
       PNH01298.1 33 RGPWTPEEDKMLTELVLSCGAQRWSTIAESII-GRSGKSCRLRWWNHL 79
                     89******************************.***********8886 PP

2Myb_DNA-binding40.85e-1385129147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +g+++  Ed  +v+ ++++G++ W+ Ia+ ++ gRt++ +k+rw++ 
       PNH01298.1  85 KGPFSDFEDAVIVRSHEKYGNK-WSVIAKLLP-GRTDNAVKNRWNST 129
                      7899999***************.*********.***********986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    
MTGRKGAERR PRASAKRNSS FLEDECDAQG EKRGPWTPEE DKMLTELVLS CGAQRWSTIA  60
ESIIGRSGKS CRLRWWNHLS PQVKKGPFSD FEDAVIVRSH EKYGNKWSVI AKLLPGRTDN  120
AVKNRWNSTL KRKHTGGSLN NKFIELYPEL DSLMCDPEAA REAAEYTNIL DDTAYGMSAT  180
QQYTGSEEEE HEAEDEEEGH MSDDSEQPPA RRPAARRAVH LRQPSQRHLQ QQQQAPLSWP  240
AAGSESTEDE GALEDPMAAR RQSQQQAQAL SLSPSCSPLS SSDTVQTHHL LQRTHSQPEQ  300
QQAAGCMHWV QHAPQNDASA PLPSCEQPPA KRSRASPHAQ RDTQPPASPP QMPSLSAPCL  360
AAAPAAAACD LLLASSTGCE MYGGAPAVAT SCSGPIPRLV LDPCSSAAHA CAPAPPMQQR  420
QLQQQQQHQQ QALFGAECAM PLCAPPAPAG ALAEPTDDLE WQTIMESLEV AIPTEDNLDA  480
PDDWADVLLQ APQEQAAGAA AGRPPVSSWP CVPPLPMQAP SAALQMQMQM AAQQLQAAPM  540
AQSEQAMQPC KWSAPSLVAA PKRQRAVAGP PQPQPQLAMQ TQLLMPRRSN SDFAGWTFQD  600
FGGLAFPYAG DAGMAFFGQQ LLPQQPAPYA QQQSCFTPSS YDLSRLGCGG AFADPLTFLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67300.14e-39MYB family protein