PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PNH00751.1

Organism

Tetrabaena socialis

Taxonomic ID

47790

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena

Family

SBP

Protein Properties

Length: 868aa MW: 89572.5 Da PI: 9.2215

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PNH00751.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	79.5	5e-25	74	146	2	74
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT------- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrr 74 Cqv+gC +dls+a++y++r++vCe h kap ++g + rfC qCs+fh+++ f+ ++r+C ++L++ + r PNH00751.1 74 CQVDGCGTDLSNARKYFQRYRVCERHLKAPILQMDGNSVRFCDQCSKFHDITAFEGSRRTCNEKLERTRQARS 146 *****************************************************************98765443 PP

Sequence ? help Back to Top
Protein Sequence Length: 868 aa Download sequence
METFAGYATN AGYIAHAAHE APRSGELGRS VYTHHSPPRK GVLREASFTD DDDDEEERRM 60 RLEGMARCAK PLKCQVDGCG TDLSNARKYF QRYRVCERHL KAPILQMDGN SVRFCDQCSK 120 FHDITAFEGS RRTCNEKLER TRQARSDKRR QQNMQAERAQ RGGRWRPRLY EIPAPPKRPY 180 DGLSLEYPAE GVEDLEMEAS GYHYAPKRGR SMKPPYAPAP LQLLAPPPSA PLLPPPLLLP 240 PEPVGASGIL ALQRAAATAH PHAHASLHTS LHTSLHHPLH HPLHTSLHNP LHTSLHNPLH 300 HHADGASSLS SWDDGHPQLQ LIRHDSISSR PGTAAAGHGG ALPYMLQGGG GVSAAGEPGA 360 ALMAQHMLMG PRGTRAGGVG GGAAAARAGL GLGRELEDWG LGGTGGVGRL TLAADAPAAP 420 TAQLLLAGLY GPGGGGGGAS GGGRDAAGLG GPALAAALAG LQQTQGQRGS GGGGDGGGVR 480 LRQKGGQQLG EGQAAARVGL ARCEGGPLLS QSAPAPAGEV IGGRYAAAAG ALALQQQQRV 540 LQLQLPSSKA AAGVQLVYGG GDGRGLRSGG GSGSGSGDGL RSSADGEELY DGRAYPLEDG 600 GGGGGQAAAG AAGARGGSPG NGGGRRAGWG GGLAQLGGDT AVELLLAHLA SAGGDAAGLD 660 LAPLLAAVAA AGGRGAAASR QLPVLDLGQK QGQGQRQGQG SEEVRGGGGG GAGAEGRGRG 720 GPQLQDLGRA AGTERGPLER SLSLQAQREP ARRQPQEQPQ VVVRVGGGGS RRSPGADADA 780 SRPSLAARVQ QQPQQRPYGQ DLARLPPPQQ QQQQERQQQA AQREREQAAQ REREGELEGE 840 HGAEQQQFRH LKWLQEHLQQ MGVQVVLQ

Sequence ? help Back to Top

Protein Sequence Length: 868 aa Download sequence

METFAGYATN AGYIAHAAHE APRSGELGRS VYTHHSPPRK GVLREASFTD DDDDEEERRM  60
RLEGMARCAK PLKCQVDGCG TDLSNARKYF QRYRVCERHL KAPILQMDGN SVRFCDQCSK  120
FHDITAFEGS RRTCNEKLER TRQARSDKRR QQNMQAERAQ RGGRWRPRLY EIPAPPKRPY  180
DGLSLEYPAE GVEDLEMEAS GYHYAPKRGR SMKPPYAPAP LQLLAPPPSA PLLPPPLLLP  240
PEPVGASGIL ALQRAAATAH PHAHASLHTS LHTSLHHPLH HPLHTSLHNP LHTSLHNPLH  300
HHADGASSLS SWDDGHPQLQ LIRHDSISSR PGTAAAGHGG ALPYMLQGGG GVSAAGEPGA  360
ALMAQHMLMG PRGTRAGGVG GGAAAARAGL GLGRELEDWG LGGTGGVGRL TLAADAPAAP  420
TAQLLLAGLY GPGGGGGGAS GGGRDAAGLG GPALAAALAG LQQTQGQRGS GGGGDGGGVR  480
LRQKGGQQLG EGQAAARVGL ARCEGGPLLS QSAPAPAGEV IGGRYAAAAG ALALQQQQRV  540
LQLQLPSSKA AAGVQLVYGG GDGRGLRSGG GSGSGSGDGL RSSADGEELY DGRAYPLEDG  600
GGGGGQAAAG AAGARGGSPG NGGGRRAGWG GGLAQLGGDT AVELLLAHLA SAGGDAAGLD  660
LAPLLAAVAA AGGRGAAASR QLPVLDLGQK QGQGQRQGQG SEEVRGGGGG GAGAEGRGRG  720
GPQLQDLGRA AGTERGPLER SLSLQAQREP ARRQPQEQPQ VVVRVGGGGS RRSPGADADA  780
SRPSLAARVQ QQPQQRPYGQ DLARLPPPQQ QQQQERQQQA AQREREQAAQ REREGELEGE  840
HGAEQQQFRH LKWLQEHLQQ MGVQVVLQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42200.1	2e-18	SBP family protein