PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNG99700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | NF-YC | ||||||||
Protein Properties | Length: 195aa MW: 19995 Da PI: 5.972 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 76 | 5.3e-24 | 1 | 49 | 53 | 101 |
NF-YC 53 lfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101 +fileltlrsw+haeenkrrtl+++d+aaa+t+tdifdflvdivpr++ PNG99700.1 1 MFILELTLRSWMHAEENKRRTLQRNDVAAAITKTDIFDFLVDIVPREDA 49 8*********************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 195 aa Download sequence |
MFILELTLRS WMHAEENKRR TLQRNDVAAA ITKTDIFDFL VDIVPREDAK PEDGQATASM 60 PPPPPAALPS ASMGLGPRPQ GLPGHPALGP GGLFFQMPPG ALGGDPSQAA AAAAAMMRPP 120 MPPMGVDPAL MSMYQQQQLM TGQGWPHMAG LPPPVGLGSA AGAAAMAAQV QHHQMQAAAA 180 AAAAAAGQQG QPSAD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 19 | 25 | RRTLQRN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G63470.2 | 3e-26 | NF-YC family protein |