PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNG99641.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | GATA | ||||||||
Protein Properties | Length: 638aa MW: 63935.3 Da PI: 5.7466 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 54.5 | 1.6e-17 | 147 | 176 | 1 | 30 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyy 30 C+ Cg+t+Tp+WR+gp g+ktLCnaCG++y PNG99641.1 147 CVECGATQTPQWREGPAGPKTLCNACGVRY 176 ****************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 638 aa Download sequence |
TDPSAAPLQV AWYERRFNLD GVGCEREVVA LEEAPSVNPI GCISGKCFIA KAVSKDEAER 60 LADGDGMEVF FCRGVFQQQL NSFMPYPELG EDAAAGGCKR SGKRQPGVSE MVADSEDAVT 120 QKRVRYADEQ AAAPVRRTGK LVSGRTCVEC GATQTPQWRE GPAGPKTLCN ACGVRYVRAQ 180 QRASKRAVAL GLSRSACGSG GRQSRAPKGA KADAARCSPV RAAPSDAPPQ QRPSRQAALL 240 AANKTAQYAR TGVFPQSAMD IQPYGSVQAT AAVQHQQQHH NHHHAADASS GGSGGGAVCG 300 SAPTAAAHAL SGTPDCSPFH DPCGSEQEGV TVEVVVGSTE GDADCCGAAS ASAAGAPAAA 360 GDACAYPLPA SCPQLPPPFA SFLAASSAGA LGEGAAATGL ALAASPVLVA VAMGVPGRDA 420 MVPVLPLPSA PPATHALACH PHGALLGGGG GGLLRMSSDA LRLAASNPNG CVLLAPGHHS 480 HRDLCGAAER AASRGSGGGG GCTPSLSGGS LGLAAAACCD DHPTAPLVVS VPVSPTSARV 540 GGYAAVYDAA GLGTCAEAEE EDARMEEAFG GGCLHEHHHH RLQLQLHMEG CGGGGGMLQC 600 GGGVEDEFGP LVEAEVDFGL GADGGMGLGG GDEGLFDE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24050.1 | 1e-13 | GATA family protein |