PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PNG99373.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Tetrabaenaceae; Tetrabaena
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Family | SBP | ||||||||
Protein Properties | Length: 180aa MW: 20685 Da PI: 8.1371 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 73 | 5.4e-23 | 2 | 47 | 31 | 76 |
S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S- CS SBP 31 pvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkk 76 ++v+ +g+eqrfCqqC+rfh l+efD +krsCr rL++hn+rrrk+ PNG99373.1 2 SMVMRDGIEQRFCQQCGRFHGLTEFDGTKRSCRARLQRHNARRRKR 47 68999***************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
ASMVMRDGIE QRFCQQCGRF HGLTEFDGTK RSCRARLQRH NARRRKRPDQ RGGDGGSDEP 60 RKAVLQLLSP LDGVSLGDHD GWQGAPAPLH TDLLPLLAQQ QQLQQRDLQQ QHQHHQQQQR 120 DLSRELLHMQ QQMQMQQLRY QQQQAMSLEA AAARLDGAGR NDEAADWQQQ EDRERAPPGM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69170.1 | 1e-10 | SBP family protein |