PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO04025.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 363aa    MW: 39741.3 Da    PI: 7.251
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO04025.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.22.8e-20172221255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  y+GVr+++ +g+WvAeIr p++   r+r +lg+f+taeeAa a+++a+ kl+g
  POO04025.1 172 LYRGVRQRH-WGKWVAEIRLPKD---RTRLWLGTFDTAEEAALAYDRAAYKLRG 221
                 59******9.**********977...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    
MGATMDFYSS VSLQSDPLRG ELMEALEPFM KSASPTIQSP SSNSSSSPYL PSTSSSHSSS  60
SYLSFSPSVQ TQPGFYQDGC STSMTQVFSD GYSNQSLFGI EQLQPGLIGL NGLTPSQIHQ  120
IQAQFQFQNH QPHLGFHPNQ PNHHHHHHSL SYLAPKPVPM KQVGSPPKPT KLYRGVRQRH  180
WGKWVAEIRL PKDRTRLWLG TFDTAEEAAL AYDRAAYKLR GDFARLNFPH LRHQGSAELG  240
DYKPLHSAVD AKLQAICQNL AESQKQGKKA AKPTAAAAKR AAAKKSLETV AAPVESQGSE  300
NCYKAEISSS SPAMTESDGS AGSSPLSDLT FPDQMESPWE YSAPDNCMLE KYPSEIDWAS  360
ILA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.11e-61ERF family protein