PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO03223.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 331aa MW: 37374.5 Da PI: 8.1258

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO03223.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.9	1.4e-51	12	139	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 lppGfrFhP+deelv++yL kkv++++ +l + evd++k+ePwd+p+ + + kewyf+s+rd+kyatg r+nrat+sgyWkatgkd+++l+k + POO03223.1 12 LPPGFRFHPRDEELVCDYLMKKVSHSDSNL---LIEVDLNKSEPWDIPEIACVGGKEWYFYSQRDRKYATGLRTNRATASGYWKATGKDRPILRKgsCS 107 79**********************9766...789********7666689***********************************97777 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 +lvg++ktLvfy+grapkg+ktdWvmhe+rle POO03223.1 108 ALVGMRKTLVFYQGRAPKGKKTDWVMHEFRLE 139 78*************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MMSSISMVES KLPPGFRFHP RDEELVCDYL MKKVSHSDSN LLIEVDLNKS EPWDIPEIAC 60 VGGKEWYFYS QRDRKYATGL RTNRATASGY WKATGKDRPI LRKGSCSALV GMRKTLVFYQ 120 GRAPKGKKTD WVMHEFRLEG PLAPKLSSLK EDWVLCRVFY KNREVASAKP SLGIAYYGEK 180 PGSNSKSLPP LMDAYISFEK PQKTHLSEHD YIHQQVPCFS NNINNFSQNY QNHDLIFKHI 240 THMEPNLPIK TTSTTSEATP GGMPNLIDST FINSLNPCIN GDNEVLRAVL DQLTKMESNP 300 NLKESPPISG GEGSSESYLS EVGMPNIWGH Y

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G56010.2	1e-104	NAC family protein