PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO03214.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

HSF

Protein Properties

Length: 498aa MW: 55900 Da PI: 5.1453

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO03214.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	116.7	1.5e-36	21	113	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d+++++++sws+++nsfvv+d +fa+++LpkyFkh+nf+SFvRQLn+YgFkkv+ ++ weF+++ F +g+k+ l++i POO03214.1 21 FLSKTYDMVDDPSTDSIVSWSSQNNSFVVWDAPQFARDLLPKYFKHNNFSSFVRQLNTYGFKKVDPDR---------WEFANEGFLRGQKHILKSIS 108 9**************************************************************999.........**************** PP XXXXX CS HSF_DNA-bind 99 rkkse 103 r+ks+ POO03214.1 109 RRKST 113 986 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MAASRETSSI SNSANSAPPP FLSKTYDMVD DPSTDSIVSW SSQNNSFVVW DAPQFARDLL 60 PKYFKHNNFS SFVRQLNTYG FKKVDPDRWE FANEGFLRGQ KHILKSISRR KSTHTHQQSQ 120 APSSQAGACV ELGNFGMEEE VERLKRDKNV LMQELVRLRQ QQQTTDHQLQ NVGQRVQVME 180 QRQQQMMSFL AKAMHRPGLL AQLVQKQNES NRHITGGNKK RRLPRQEEEN SASDHWIHAP 240 DGQIVKYQPS MNEAAKAMLR QILKMNTSPR REPSMNNPDI FLIDNVPSSN ALDTGNIDTY 300 SRISEVPFSE VPQNFAQLDP GFPVSTPSKS VSEIRSSHDV VSNCVEVARL SEVNVHSYQE 360 DKALPDFITL LGTQPQSTEE HSDVNSGTTN AESPDMSAAL DGTMLIETDA FSSDSRDGEI 420 LSDGVPKLPG INDSFWEQFF TGSPLSGDMD EINTSSVDCE MTQDQDFLVG KEDGWDHTRH 480 MTHLTEGMGL LASECRRG

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MAASRETSSI SNSANSAPPP FLSKTYDMVD DPSTDSIVSW SSQNNSFVVW DAPQFARDLL  60
PKYFKHNNFS SFVRQLNTYG FKKVDPDRWE FANEGFLRGQ KHILKSISRR KSTHTHQQSQ  120
APSSQAGACV ELGNFGMEEE VERLKRDKNV LMQELVRLRQ QQQTTDHQLQ NVGQRVQVME  180
QRQQQMMSFL AKAMHRPGLL AQLVQKQNES NRHITGGNKK RRLPRQEEEN SASDHWIHAP  240
DGQIVKYQPS MNEAAKAMLR QILKMNTSPR REPSMNNPDI FLIDNVPSSN ALDTGNIDTY  300
SRISEVPFSE VPQNFAQLDP GFPVSTPSKS VSEIRSSHDV VSNCVEVARL SEVNVHSYQE  360
DKALPDFITL LGTQPQSTEE HSDVNSGTTN AESPDMSAAL DGTMLIETDA FSSDSRDGEI  420
LSDGVPKLPG INDSFWEQFF TGSPLSGDMD EINTSSVDCE MTQDQDFLVG KEDGWDHTRH  480
MTHLTEGMGL LASECRRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16820.2	1e-129	HSF family protein