PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO03161.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 379aa MW: 41961.9 Da PI: 5.4665

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO03161.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	58	3.2e-18	18	117	11	128
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfy 109 +ee+ L++ ++g++l+ +vi++v+ y+++P +Lp + ++f++ ++ n+ ++ gyWk+tg+ ++ ++ +g + tL fy POO03161.1 18 NEEIF-MRLEEMMNGSPLPS-NVISDVNPYQHKPAHLP-------DGIWFYIGSE--------VNKNANFGYWKTTGEASQISL-NSLITGWRSTLEFY 98 56666.55999999*999.99**********9.......3456666543........4555678*********9.9999****** PP NAM 110 kgrapkgektdWvmheyrl 128 +g+ap+g+ktdW+m+ey + POO03161.1 99 EGQAPHGHKTDWMMQEYWI 117 ***************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MCPPAAAPSH DIGFFFSNEE IFMRLEEMMN GSPLPSNVIS DVNPYQHKPA HLPDGIWFYI 60 GSEVNKNANF GYWKTTGEAS QISLNSLITG WRSTLEFYEG QAPHGHKTDW MMQEYWITRK 120 ILSKNNNAKE TSLLCNVFFV GEEKPNHEKP QKMTQADMAI QSTESVVQKS ENYTGQGSTS 180 KPQMGEDNVT ENGERVPANR MDTVPEIDYP SGGDYLELLD LQNPASPSSS SDSSCVTMSS 240 DECFDVLDLL QDLESEKGHN MVQNNAGCKL SVFASSKPTE VVMHPASTGT LDKSPSQEIL 300 VNNISVSGSA ISSKTSDKKV LKNANINQKP GFRNEGTSST SQNRLVSLRG NTTAAEEDKK 360 EARGRMKKLK KKYLCFIPF

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MCPPAAAPSH DIGFFFSNEE IFMRLEEMMN GSPLPSNVIS DVNPYQHKPA HLPDGIWFYI  60
GSEVNKNANF GYWKTTGEAS QISLNSLITG WRSTLEFYEG QAPHGHKTDW MMQEYWITRK  120
ILSKNNNAKE TSLLCNVFFV GEEKPNHEKP QKMTQADMAI QSTESVVQKS ENYTGQGSTS  180
KPQMGEDNVT ENGERVPANR MDTVPEIDYP SGGDYLELLD LQNPASPSSS SDSSCVTMSS  240
DECFDVLDLL QDLESEKGHN MVQNNAGCKL SVFASSKPTE VVMHPASTGT LDKSPSQEIL  300
VNNISVSGSA ISSKTSDKKV LKNANINQKP GFRNEGTSST SQNRLVSLRG NTTAAEEDKK  360
EARGRMKKLK KKYLCFIPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	9e-19	NAC family protein