PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO03101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | NAC | ||||||||
Protein Properties | Length: 224aa MW: 26384 Da PI: 5.0689 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 93.2 | 4.2e-29 | 54 | 180 | 4 | 128 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka..eekewyfFskrdkkyatgkrknratk..sgyWkatgkdkevlskkge 98 +rF+Ptdee v e kk+++++l+ + i++v+ y++ P +L +k+k+ +ekew +F++r++k++ g+ ++r++k sg+W+ t +++ v s +ge POO03101.1 54 FYRFDPTDEEFV-ELVLKKLNNQPLTR-NKIRDVEFYNYTPDELAEKYKQhrTEKEWLYFTPRAQKHEDGNCASRTVKdnSGFWRRTKSEQVVRSDSGE 150 58**********.88889999999988.77**************85444422667******************99765569**************9*** PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 +g k+ +vf+ g+ +k+ kt+W+m+ey++ POO03101.1 151 IIGFKDKFVFHMGEPSKSGKTNWFMQEYSV 180 ****************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MEDCHDQLKK LGDAENPSSS SSSNNNDQIP NWSLWSSSSS SSGAMYNFDR LPLFYRFDPT 60 DEEFVELVLK KLNNQPLTRN KIRDVEFYNY TPDELAEKYK QHRTEKEWLY FTPRAQKHED 120 GNCASRTVKD NSGFWRRTKS EQVVRSDSGE IIGFKDKFVF HMGEPSKSGK TNWFMQEYSV 180 LDQTTNIKFD DWVLCKVYKR KVPRSTFTVD ENEDQPSDYE DEKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G27410.2 | 1e-28 | NAC family protein |