PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02949.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 185aa    MW: 20810.4 Da    PI: 9.1958
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02949.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.19.3e-184290355
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                + GVr++  +g+WvAeIr+p   + r +r +lg+f t  eAa+a++ a++kl+g
  POO02949.1 42 FIGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSTEAARAYDDAARKLYG 90
                78***999.**********8...3.35*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MEYCKEESNN VVNRRNKKPV MERSRKKRMK GKGGPENVQC TFIGVRQRTW GKWVAEIREP  60
NRGARLWLGT FNTSTEAARA YDDAARKLYG PRAKLNLPDH HHQQHQHSSP SSGAGFESGP  120
ASRAPFTELS ADLGSMFGGL DGLSWPQLCI ESDFKEMMNS TNVGLIFGGE EFMDYSGLHS  180
PWSLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.13e-34ERF family protein