PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02724.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family Dof
Protein Properties Length: 381aa    MW: 40016.1 Da    PI: 8.6347
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02724.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof122.81.2e-3867125361
      zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                  ++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk++
  POO02724.1  67 PENLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSN 125
                 57899***************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    
MIQELLGSAG LIGGERKISI NGGVLEANTL LPPSHSPSST TTSTTSTTST TSAAATTTSN  60
SSNNNNPENL RCPRCDSSNT KFCYYNNYNL TQPRHFCKTC RRYWTKGGAL RNVPIGGGCR  120
KNKSNSPVPS SVAAGKTGNT AAGKMKMVVA SEIGRSGFGG SGFDHDQVSP SPILWGSPQN  180
SHLLALLRSA QNPNPNPLCV VKEEAPGTST GMIGSHMMTH STSTSTDSGT VVLNARSLGM  240
DPMCQAPSLG LCSSFWRNNQ INQNPHYQQM NSLIGSTSLG HDQAHQNNTS NGIQELYQRL  300
RSSSSAAAAS ANYYNDHNSG TVALNTHVGS PSLSSNSTTT SSFLESAPVA AGGGDQLGFW  360
NINPAFSWSD LPTTTTNGAY P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51700.12e-32Dof family protein