PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO02700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | Dof | ||||||||
Protein Properties | Length: 255aa MW: 26082.9 Da PI: 8.4263 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123 | 1e-38 | 30 | 90 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++++l+cprCdstntkfCyynny+ sqPr+fCkaCrryWt+GG+lr++P+Ggg+rkn k+s POO02700.1 30 EQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDIPIGGGSRKNAKRS 90 57889****************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MPSETGEQCR RPAAKTQNPG GPTAAAAPPE QEHLPCPRCD STNTKFCYYN NYNFSQPRHF 60 CKACRRYWTH GGTLRDIPIG GGSRKNAKRS RTTSGAVSAV VSDHHHGHHH HPLNATPVLV 120 PLNHQGGGGG SGLHFGEVKP SVGGLCGGSF TSLLNSTQGP AGFLALGGFG LGLGTGFEDL 180 GFGLGRGIWP FSGVVGEGGG AGHIGANGGV RGFGNTWQLE NGSDHHGGVG GLVGGGGDFC 240 SWAEPAISTP GNGLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50410.1 | 5e-48 | Dof family protein |