PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO02675.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | B3 | ||||||||
Protein Properties | Length: 138aa MW: 16087.3 Da PI: 4.9716 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 53.3 | 5.1e-17 | 27 | 112 | 8 | 99 |
-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 + +l+++ l++p kf++++g++ + + ++ + g +W++ l ++++++++kGW +F+k Lk g ++F+++g+sef + +f++ POO02675.1 27 EETLQQNKLRIPPKFVRKYGEN--LTNSVFVKLPCGSKWKMDL--MEQDNKIWFEKGWPDFAKHYALKRGSLLIFRYEGNSEF--HAVIFDA 112 44566677***********977..6667***************..9*********************************9999..7777765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 138 aa Download sequence |
MSCEPQGECN QTIFSPETLH FFTIIIEETL QQNKLRIPPK FVRKYGENLT NSVFVKLPCG 60 SKWKMDLMEQ DNKIWFEKGW PDFAKHYALK RGSLLIFRYE GNSEFHAVIF DASTVEIDYP 120 SISVDFDKSN VDLELQTP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 4e-28 | B3 family protein |