PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO02670.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | B3 | ||||||||
Protein Properties | Length: 120aa MW: 13780 Da PI: 6.2434 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 36.8 | 6.8e-12 | 16 | 71 | 45 | 97 |
EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 45 sWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 W v++++ r k ++ ++ kGW eF+++n+L++gD+++Fkl + +++++ v+++ POO02670.1 16 LWFVEVKIrspRFKTCAATILKGWHEFANDNNLEVGDVCIFKLLDGDKTSFEVSIV 71 5666664444545555567778********************77555655688776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
MKNQDDIVLC VPSVGLWFVE VKIRSPRFKT CAATILKGWH EFANDNNLEV GDVCIFKLLD 60 GDKTSFEVSI VRFAVYEYLH WSQRPLTSIE DVPFESENPF LKVLMQPTYV GPKAKHIVSF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 6e-07 | B3 family protein |