PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02668.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family B3
Protein Properties Length: 490aa    MW: 55917.8 Da    PI: 6.1191
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02668.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B351.51.8e-1628112999
                 HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                  +l+++ l+lpkkf++e+g  ++ s  + ++ + g +W+++l  +k+ + ++l+kGW +F+k   +k g +++F+++g+sef  +  +f++
  POO02668.1  28 ETLQENKLRLPKKFVREYG--ETLSDSVFVKLPCGSKWKMEL--TKHENNIWLEKGWPDFAKHYSIKRGSMLMFRYEGNSEF--HAVIFDT 112
                 4566778***********9..458889***************..**********************************9999..7777765 PP
2B346.56.6e-15210305193
                 EEEE-..-.HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SEE.. CS
          B3   1 ffkvltps.dvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkld.gr.sefel 92 
                 ffk+l+++ +v+++ +++++p +fa +++++   + +++l+ +s  sW v++++   r  s+   l kGW+eF + n L++gD+++Fkl  g  ++f  
  POO02668.1 210 FFKALMRPtHVGSKaDQFRVPSDFAMRYMKN--LEGDVVLYVPSVGSWFVEFRMrppRSESCVARLCKGWREFSNGNSLEVGDVCIFKLLdGAkTSF-- 304
                 56666554055555799***********877..4558***************997666666668888*********************762443444.. PP

                 E CS
          B3  93 v 93 
                  
  POO02668.1 305 E 305
                 3 PP
3B343.17.7e-14338434195
                 EEEE-...-HHHHT.T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTE...EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
          B3   1 ffkvltp.sdvlks.grlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgr...yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                 ffkv ++  +v+++   l +p +fa ++ ++  e+ +++l  ++g+ W  ++++   r   ++     l +GW+eF++ n+L++gD+++F+l + ++ +
  POO02668.1 338 FFKVYMQpTYVGSKaEHLDVPLDFAMSYIKN--EG-DVILLGPNGNYWHAQFKMnplR---CGnhsARLCNGWQEFANGNNLEVGDVCIFELLDVDGNK 430
                 556655404555556679*******999544..33.7***************995542...333357899*********************76544444 PP

                 .EEE CS
          B3  92 lvvk 95 
                   +k
  POO02668.1 431 TSFK 434
                 4443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    
MFPGSLGDTE QPPFSSGTLH FFSIILEETL QENKLRLPKK FVREYGETLS DSVFVKLPCG  60
SKWKMELTKH ENNIWLEKGW PDFAKHYSIK RGSMLMFRYE GNSEFHAVIF DTSTVEIDYP  120
YIPVHSDKSD VDLELQAPKD VVVEDDVEIL DDLLPCPKAR EKSPLPCSHA HKSLRTSHGL  180
DFGAKLERPL TDNERARILE RVPFECEKPF FKALMRPTHV GSKADQFRVP SDFAMRYMKN  240
LEGDVVLYVP SVGSWFVEFR MRPPRSESCV ARLCKGWREF SNGNSLEVGD VCIFKLLDGA  300
KTSFEVFIIR FAEYEYTQWS QRPLTSIERV PFVSEDPFFK VYMQPTYVGS KAEHLDVPLD  360
FAMSYIKNEG DVILLGPNGN YWHAQFKMNP LRCGNHSARL CNGWQEFANG NNLEVGDVCI  420
FELLDVDGNK TSFKVSIDRF AECASLQRSL GVDDATSARK PKGDARVKIE LDVTSARKPK  480
GDARVKIEID
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.16e-33B3 family protein