PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02520.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ZF-HD
Protein Properties Length: 351aa    MW: 38685 Da    PI: 8.9759
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02520.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer1001.7e-31126181359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  +vrY+eClkNhAas Ggh++DGCgEfmps g++gta+a+kCaAC+CHR+FHR+e++ 
   POO02520.1 126 HVRYRECLKNHAASSGGHVLDGCGEFMPS-GDDGTAEAMKCAACECHRSFHRKETDV 181
                  79**************************9.999*********************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MEVREQLDKD IGMRNTLDYN SPNRDSSPKL SSPVGSEKLS HGNTIIFNPP NSQTLDHHNQ  60
YNLSYHLNRP NKARTRDHHP DEPSPDPVTT VSPTSTTLVG GGANPKTPVN AAVSAAAAAA  120
AAIGSHVRYR ECLKNHAASS GGHVLDGCGE FMPSGDDGTA EAMKCAACEC HRSFHRKETD  180
VEFQYVPNYK DSSRRSSLVL PPQHYHPPPP PHRTHPHPHH HHHHHHQFAL HGLAATPGSG  240
AGPIPPVMMA FGGGGIAAES SSEDLNVFQS NYGGGGRPQQ SAPASSKKRF RTKFNQEQKD  300
KMTEFAEKLG WRIQKHDEQE VQQFCSEVGV KRQVFKVWMH NNKQAMKKKQ M
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.12e-64ZF-HD family protein