PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02367.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family SBP
Protein Properties Length: 821aa    MW: 91662.5 Da    PI: 6.7878
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02367.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP114.36.9e-36144220177
                 --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS
         SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 
                 +Cqv+ C a+++e+k yhrrh+vC ++++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrrk +
  POO02367.1 144 RCQVPTCGANIKELKGYHRRHRVCLKCANAATVVINGESKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNRRRRKIE 220
                 6**************************************************************************86 PP

Sequence ? help Back to Top
Protein Sequence    Length: 821 aa     Download sequence    
MEEASPSSSQ SPPQDSEQLK DPSEMEMEVG HVPLLPDEAG SNVWDWGDLL DFTVDDDLGI  60
QWDSGPVQNH PDPVQSEPPG QDNPDPSRVR KRDPRLICSN FMAGRVPCAC PEVDEKLMEL  120
EEEEAGHDKK RTRTTTRSPA GVARCQVPTC GANIKELKGY HRRHRVCLKC ANAATVVING  180
ESKRYCQQCG KFHVLSDFDE GKRSCRRKLE RHNRRRRKIE PKRPTEKECL GDLQSEDVSG  240
DGEAGKDCLQ LSSQKVQKET CVESEGGHIS PLYTPSDPKD VQSDGFISLV DSGETQMDAG  300
KYNSKHGVSL SSCDNRSAYS SVCPTGRISF KLYDWNPAEF PRRLRHQIFQ WLASMPVELE  360
GYIRPGCIIL TVFVAMPSFM WMKVSEDPIS YVHDFVVVPG GMLSGRGNML VYLNNTLLHV  420
VKGGSSVIKA KVNVRAPRLH YVHPICFEAG QPMEFVACGS NLLQPKLRFL LSFSGKYLAY  480
DYNPEYTHFQ TEGNTASDFD HQFYRICVPR TEPNCFGPLF IEVENEAGLS NFIPVLIGDK  540
ETCSELKVIQ QRLNESLFSD GPYFSSTGSL SKSWEVSSQR KTVFSEVILD IAWLLKKPGS  600
ENFQQITASQ VQRISCLLNF LISIESTTIL EKILRNLMTV VDKMKLKDVH NGINDADLRA  660
LQKYVDHAQR LCCQKLQKIG GLGPYSRNLI LVEDPVCKSC SQNDACSDAS FLKQDTEILV  720
HGNLGNVTGS TCNDTGESIP LLKEKLGLKS DHIVEWPIKA TSCTTSAEVL VSHRRAILRF  780
RPTLCLIATV AVCLGVCSVL FHPYKVSDIA VSIRRCLLNK V
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1206217RRKLERHNRRRR
2207224RKLERHNRRRRKIEPKRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18830.10.0SBP family protein