PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO02367.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | SBP | ||||||||
Protein Properties | Length: 821aa MW: 91662.5 Da PI: 6.7878 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 114.3 | 6.9e-36 | 144 | 220 | 1 | 77 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +Cqv+ C a+++e+k yhrrh+vC ++++a++v+++g+++r+CqqC++fh ls+fDe+krsCrr+L++hn+rrrk + POO02367.1 144 RCQVPTCGANIKELKGYHRRHRVCLKCANAATVVINGESKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNRRRRKIE 220 6**************************************************************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 821 aa Download sequence |
MEEASPSSSQ SPPQDSEQLK DPSEMEMEVG HVPLLPDEAG SNVWDWGDLL DFTVDDDLGI 60 QWDSGPVQNH PDPVQSEPPG QDNPDPSRVR KRDPRLICSN FMAGRVPCAC PEVDEKLMEL 120 EEEEAGHDKK RTRTTTRSPA GVARCQVPTC GANIKELKGY HRRHRVCLKC ANAATVVING 180 ESKRYCQQCG KFHVLSDFDE GKRSCRRKLE RHNRRRRKIE PKRPTEKECL GDLQSEDVSG 240 DGEAGKDCLQ LSSQKVQKET CVESEGGHIS PLYTPSDPKD VQSDGFISLV DSGETQMDAG 300 KYNSKHGVSL SSCDNRSAYS SVCPTGRISF KLYDWNPAEF PRRLRHQIFQ WLASMPVELE 360 GYIRPGCIIL TVFVAMPSFM WMKVSEDPIS YVHDFVVVPG GMLSGRGNML VYLNNTLLHV 420 VKGGSSVIKA KVNVRAPRLH YVHPICFEAG QPMEFVACGS NLLQPKLRFL LSFSGKYLAY 480 DYNPEYTHFQ TEGNTASDFD HQFYRICVPR TEPNCFGPLF IEVENEAGLS NFIPVLIGDK 540 ETCSELKVIQ QRLNESLFSD GPYFSSTGSL SKSWEVSSQR KTVFSEVILD IAWLLKKPGS 600 ENFQQITASQ VQRISCLLNF LISIESTTIL EKILRNLMTV VDKMKLKDVH NGINDADLRA 660 LQKYVDHAQR LCCQKLQKIG GLGPYSRNLI LVEDPVCKSC SQNDACSDAS FLKQDTEILV 720 HGNLGNVTGS TCNDTGESIP LLKEKLGLKS DHIVEWPIKA TSCTTSAEVL VSHRRAILRF 780 RPTLCLIATV AVCLGVCSVL FHPYKVSDIA VSIRRCLLNK V |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 206 | 217 | RRKLERHNRRRR |
2 | 207 | 224 | RKLERHNRRRRKIEPKRP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G18830.1 | 0.0 | SBP family protein |