PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO02044.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family NAC
Protein Properties Length: 340aa    MW: 39032.2 Da    PI: 4.5265
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO02044.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM768.8e-2491495128
         NAM   5 frFhPtdeelvveyLkkkvegkkleleevikev..diykvePwdLp.k.kvkaeekewyfFskrdkkya..tgkrknra......tksgyWkatgkdke 91 
                 +rF Ptdeel   yL +k++g  ++  + i+++  ++y   P+dL+ +   +  ++e y+Fs+r + ++  +gkr +r+      t  gyW+a+  d++
  POO02044.1   9 YRFMPTDEELC-SYLWNKIHGYYVPPYT-INTIegGVYARAPRDLDwTpVSYLPNHERYYFSRRVRVSTrdNGKRVKRQlesseeTGGGYWRASTGDQK 105
                 8*********9.9**********77744.5555348*********8543334467899*****999887556889999778888889************ PP

         NAM  92 vlskkgelvglkktLvfy.......kgrapkgektdWvmheyrl 128
                 v++++++++g +k L f+         ++++++ t+W+mheyrl
  POO02044.1 106 VFNSQNQTIGYRKLLKFHayqnnnnAHNRKQAKPTEWIMHEYRL 149
                 ******************8877664356667789********98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MAIPIGHSYR FMPTDEELCS YLWNKIHGYY VPPYTINTIE GGVYARAPRD LDWTPVSYLP  60
NHERYYFSRR VRVSTRDNGK RVKRQLESSE ETGGGYWRAS TGDQKVFNSQ NQTIGYRKLL  120
KFHAYQNNNN AHNRKQAKPT EWIMHEYRLA GDTEWVVCRI KDKNIKKRKP TPIPVEDHAV  180
GFQSNTLQSN NLIDNSGTLD ELEGVEKDEL DGLKNELDEF VSILETVLKD NSAKIDELDG  240
VDMHELEQGG FTSSLKEKLT VEDLTLEEFN NLLSTLDDND FIDSNNAKMN EDQLLSTHQP  300
PTIDASQEDN PEDNEAMIED LLVSDGCYIC TEVDQPTPMR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.23e-17NAC family protein