PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | POO01931.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 231aa MW: 26834.2 Da PI: 4.6732 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 43.9 | 7.4e-14 | 24 | 182 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgk...rknratksgyWkat 86 lp G+rF+Ptd e + yL k+ + + +l++++ ++d +d+ + + k e++++ F +++ k+++++ r+ +g+W+ POO01931.1 24 LPLGYRFSPTDLESM-WYLSLKTMNLPipgpKNLFRHLVDAD--GNASNDMFNeidalmEGKIPENQLFLFLPQHDKSQSKNglgYYCRKGGNGFWRVH 119 699***********9.9*********9444433334444444..444444432233333334467799999999888886553446778889*****99 PP NAM 87 gkdkevlsk..kgel.....................vglkktLvfykgrapkgektdWvmheyrl 128 ++ ++++ + +g k+ +v+y+g+++ g +t+W+m+e++l POO01931.1 120 SSKPLIHRTsvR--PlkdcggtfmelfaegkgawhkIGKKTRFVYYEGKEKPGIQTEWLMDEFEL 182 887767665440..2555666677777777788888***************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 231 aa Download sequence |
MKDEYELCEG TLEDKGREIS QISLPLGYRF SPTDLESMWY LSLKTMNLPI PGPKNLFRHL 60 VDADGNASND MFNEIDALME GKIPENQLFL FLPQHDKSQS KNGLGYYCRK GGNGFWRVHS 120 SKPLIHRTSV RPLKDCGGTF MELFAEGKGA WHKIGKKTRF VYYEGKEKPG IQTEWLMDEF 180 ELNHNYLPKK VTKCVLSKVF RKEISIEPSE DEDEDEDEDD EMTDYSDDYY E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G04070.2 | 2e-10 | NAC family protein |