PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO01858.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 231aa MW: 26655 Da PI: 7.5445 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.9 | 2e-19 | 69 | 121 | 4 | 56 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 + ++t++qle Le+ F+++ +++ +++ +L++ lgL+ rq+ vWFqNrRa++k POO01858.1 69 KKRLTADQLESLERSFQEEIKLDPDRKMKLSRDLGLQPRQIAVWFQNRRARWK 121 5679************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 117.3 | 8.5e-38 | 68 | 158 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kk+rl+++q+++LE+sF+ee kL+p+rK++l+r+Lglqprq+avWFqnrRAR+k+kqlE+ y+aLk+++d +++e+++L++ev +L+ l+ POO01858.1 68 KKKRLTADQLESLERSFQEEIKLDPDRKMKLSRDLGLQPRQIAVWFQNRRARWKAKQLERLYDALKQEFDVMSKEKQKLQEEVMKLKGMLR 158 9*************************************************************************************98776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MDWNSNLRHY VSRPECSYGF LYNYNYDQYQ GMEMKHQGLM SEGAQGQMVA SMEKDQSGIS 60 YGCGQVDKKK RLTADQLESL ERSFQEEIKL DPDRKMKLSR DLGLQPRQIA VWFQNRRARW 120 KAKQLERLYD ALKQEFDVMS KEKQKLQEEV MKLKGMLRDQ GAWKQVSTGG YTEISGEETV 180 ESTSGAIRSS SKSLGANQHH QTMAECSTHI LNVEEYNPVS PPYWGSLPSY P |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 68 | 97 | KKKRLTADQLESLERSFQEEIKLDPDRKMK |
2 | 116 | 124 | RRARWKAKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 3e-57 | HD-ZIP family protein |