PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO01127.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 364aa    MW: 40928.8 Da    PI: 4.8401
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO01127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.75.8e-10173215754
                 HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 + Er+RR r+++++  Lr+l+P+      +K++Ka+i+  Av Y+++L
  POO01127.1 173 ISERKRRGRMKEKLYALRSLVPNI-----TKMDKASIVGDAVIYVQEL 215
                 78*********************7.....7****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    
MYEMDEAIIP NSSAPNPIMH NFNGLELHDF FDGTNNIIPE DRFVNLIRGA ETENPFVNFD  60
HCDLINGTNY FVDDHDHNQF GPLTPGDHVF GFNGVSTGST DDHNPNISLF LNNLDWPSFD  120
GKPRSGDHDL EEEEVEEEEE NDREGSSETN RGTSASSAKK SKAKCGDRSK TLISERKRRG  180
RMKEKLYALR SLVPNITKMD KASIVGDAVI YVQELKMQAK KLKDEIRGLE TSLLGSQRYQ  240
GSSININNSP SQVHVGNANN ITNQLIFKNI FQMDMFQVEE RGFYMRLVCN KGEGVVASLY  300
KVLESLTSFD VQTSNLASTV DGFELKVTLR VKDTVREMSL PDLKLWVIGA LLNQGFEFKS  360
PFSP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.17e-80bHLH family protein