PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00969.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family HD-ZIP
Protein Properties Length: 850aa    MW: 93201.2 Da    PI: 6.2485
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00969.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.91.8e-182381357
                --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
    Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                k  ++t+eq+e+Le+++ ++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  POO00969.1 23 KYVRYTPEQVEALERVYSECPKPSSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 81
                6789*****************************************************97 PP

2START174.66.2e-551723792204
                 HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEXX CS
       START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvael 98 
                 +aee+++e+++ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  +++  v+e+l+d+  W ++++ +++l vi +g  g+++l ++++
  POO00969.1 172 IAEETLAEFLSKATGTAVDWVQMIGMKPGPDSIGIVAVSRNCSGVAARACGLVSLEPT-KVAEILKDRTSWFRDCRCVDVLSVIPTGngGTIELVYMQT 269
                 68999*****************************************************.8888888888****************************** PP

                 TTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHH CS
       START  99 qalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaega 193
                 +a+++l++ Rdf+++Ry+ +l++ ++vi+++S++s++  p    ss +vRae+lpSg+li+p+++g+s +++v+hvdl++++++++lr+l++s+ + ++
  POO00969.1 270 YAPTTLAAaRDFWTLRYTTSLEDNSLVICERSLTSTTGGPAgpaSSCFVRAEMLPSGFLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQ 368
                 ****************************************9999999**************************************************** PP

                 HHHHHHTXXXX CS
       START 194 ktwvatlqrqc 204
                 k++va+l++ +
  POO00969.1 369 KMTVAALRHIR 379
                 *******9865 PP

Sequence ? help Back to Top
Protein Sequence    Length: 850 aa     Download sequence    
MALVMHKDSS ANSINNKQMD TSKYVRYTPE QVEALERVYS ECPKPSSLRR QQLIRECPIL  60
SNIEPKQIKV WFQNRRCREK QRKEASRLQT VNRKLTAMNK LLMEENDRLQ KQVSHLVYEN  120
GYMRNQLQTA SGTTTDNSCE SVVMSGQNQQ QQNPTPQQPQ RDANNPAGLL AIAEETLAEF  180
LSKATGTAVD WVQMIGMKPG PDSIGIVAVS RNCSGVAARA CGLVSLEPTK VAEILKDRTS  240
WFRDCRCVDV LSVIPTGNGG TIELVYMQTY APTTLAAARD FWTLRYTTSL EDNSLVICER  300
SLTSTTGGPA GPASSCFVRA EMLPSGFLIR PCEGGGSIIH IVDHVDLDAW SVPEVLRPLY  360
ESSKILAQKM TVAALRHIRQ IAQESSGEIQ YGGGRQPAVL RTFSQRLCRG FNDAVNGFSD  420
DGWSLLGSDG VEDVTIVVNS SSNKFLGSQY SASIFPTFGG VLCAKASMLL QNVPPALLVR  480
FLREHRSEWA DYGVDAYSAS CLKASPYAIP CARPGGFPSS QVILPLAHTV EHEEFLEVVR  540
LEGHAFSPEE VALARDMYLL QLCSGVDENA VGSCAQLVFA PIDESFADEA PLLPSGFRVI  600
PLDPKADMPG ATRTLDLAST LEVGSGSARP ASEADPNSYN LRSVLTIAFQ FTFENHTRDN  660
VAAMARQYVR SVVGSVQRVA MAIAPSRLSS HLGPKPLPQS PEALTLAQWI CRSYRIHTGG  720
DIFQVDSPSG DAVLKRLWHH SDAIMCCSVK TNASPVFTFA NQAGLDMLET TLVALQDIML  780
DKILDEAGRK ILCSEFSKIM QQGFAYLPAG ICVSSMGRAA SYEQAVAWKV LNDEDSNHCL  840
AFMFMNWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein