PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO00924.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | GeBP | ||||||||
Protein Properties | Length: 248aa MW: 28848.5 Da PI: 9.4187 | ||||||||
Description | GeBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF573 | 79.6 | 4.8e-25 | 51 | 142 | 5 | 97 |
DUF573 5 rlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskkiWg 97 l+s++D+i+lLqGli f +k+g + + +fy+ +kks++ k+sk+ql + r+ +Kf +++ ++ +g +p+f+++hdqk++elsk+iWg POO00924.1 51 ILFSQDDQILLLQGLIAFLEKHG-KKNRNFGEFYDVIKKSLHPKMSKKQLRRQVSRMERKFVDNEPTKGDGGSPTFANPHDQKVYELSKIIWG 142 46*********************.55889**************************************99***********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MDDTDHYNSS IVPDSADDYE RPSEKKAKFT AEEKMKQVDD AHHLKQASQV ILFSQDDQIL 60 LLQGLIAFLE KHGKKNRNFG EFYDVIKKSL HPKMSKKQLR RQVSRMERKF VDNEPTKGDG 120 GSPTFANPHD QKVYELSKII WGNSTTTTTT TTTTTTTTTN TNTTVVHEDH RLQVSDDIDG 180 PLSIVLKDFV THNGLDLNWV EEPKRKHLAR RWKKYKIAEC NYFHVRAKFQ DMMHHVKMQV 240 YSRELARQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G11510.1 | 1e-11 | GeBP family protein |