PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO00922.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

GeBP

Protein Properties

Length: 281aa MW: 31449.2 Da PI: 8.4251

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO00922.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	97	1.8e-30	70	164	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk..aksgkepsfskehdqkifelskkiWg 97 fqr wse+Dei++LqG+ ++ +++ +di +fy+ ++ksis++++k+ l +K+ rLKkKf + ++k a+++++p+fsk+hdqk+felsk+iWg POO00922.1 70 PFQRTWSEDDEITILQGFSEYSKENR---ISDIAGFYNSIHKSISADITKKRLGDKLNRLKKKFLDYESKcgAAHNQSPTFSKPHDQKVFELSKMIWG 164 59*****************77666...77*********************************999999*********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MHASSDSEYK CEKDSDSDSD SDSDSDSSYT ATKRRKSLPS TSAGGVKRKK RTVVEKKKVV 60 GGGGGRTLRP FQRTWSEDDE ITILQGFSEY SKENRISDIA GFYNSIHKSI SADITKKRLG 120 DKLNRLKKKF LDYESKCGAA HNQSPTFSKP HDQKVFELSK MIWGNTNTNT NTNTPTSTST 180 AAAPAIMVDE GVIPEKLSGG RGLALEVNVT DDYDPIIRLP RLLEYFLSDH ELDLDLFEGS 240 MESLEKSWKK VKSCERQYLV QKSRLNAFVN QLKLEATNPT E

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	33	51	KRRKSLPSTSAGGVKRKKR
2	34	52	KRRKSLPSTSAGGVKRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G11510.1	6e-23	GeBP family protein