PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO00892.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

Nin-like

Protein Properties

Length: 927aa MW: 103759 Da PI: 6.4748

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO00892.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.6	6.1e-29	592	643	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i+l++l++yF++++kdAAk++gvc T+LKriCRq+GIkRWP+Rkik++ POO00892.1 592 AEKTITLQVLRQYFAGSLKDAAKSIGVCSTTLKRICRQHGIKRWPSRKIKKV 643 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 927 aa Download sequence
MEDGVLSPAT ILGAPADYPM DLDFMDELFL EGCWLETRDG SEFLNQNPPS SSPLFDPLFW 60 PTLEPNGESN ANPSPKSNQE ERHRSLFIES QGKSPLHTLP PPWATTDVVK YSGVSEAHIT 120 EGSSELSRRW WIGPKANPGP SSSVMERLWR ALMYIKDVIR DKDILVQIWV PVHEEGRRVL 180 TTRDLPFALD DNSSKLARYR DISVKYQFSA EEDSKELVLG LPGRVFSGKV PEWTPDVRFF 240 RNDEYPRLIH AQQNDVRGTL ALPIFELDSR TCLGVVEIVM TTQKIKYRPE LESVCKALEA 300 VDLKSSEVLS TQNVFNKYYQ AAIPEIQQVL RSACDTHRLP LAQTWVPCIY QGKEGCRHSD 360 ENYGQCVSTV DHACYALDPQ VQSFHEACSE HHLFRGQGVV GLAFMTNQPC FSADITSYTK 420 TEYPLSHHAR MFRLQAAVAI RLRSIHTGAA DFVLEFFLPV DCKDPEEQKK MLTSLSLIIQ 480 QCCQSLRVIT DKELEEESGS RVDEVVVPSN PRPARNTCFT EAPQNDTDLS LFPEEKKPRE 540 ISDGRLSKLS DNQRDSILKP SVDCVEECST VGEGSFSSVG VGKTGERRRT KAEKTITLQV 600 LRQYFAGSLK DAAKSIGVCS TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVQGA 660 SGAFQIDSFY TNFPELASPN VSGTSPFSTS KPNDHPMPSN MQPGDGGIFS VQAATAAATS 720 KSSSSCSQSS SSSHCCSSRS QLHPQTWNNV TSSDDLIAGE SSGGGDDVVL KRVRSEAGLN 780 ACSEDGRKLL PRSQSHKSLM EHHKTEKWFP PSSAKNNNNG ARIPQQQGEF QKVKVTYGED 840 RTRFRMQNNW GFIDLQQEVG RRFGIQDMVK FTLKYLDDDS EWVLLTCDAD LEECFEVYRS 900 SQNATIKLSL QPSRHLYRGC LRGNDPL

Sequence ? help Back to Top

Protein Sequence Length: 927 aa Download sequence

MEDGVLSPAT ILGAPADYPM DLDFMDELFL EGCWLETRDG SEFLNQNPPS SSPLFDPLFW  60
PTLEPNGESN ANPSPKSNQE ERHRSLFIES QGKSPLHTLP PPWATTDVVK YSGVSEAHIT  120
EGSSELSRRW WIGPKANPGP SSSVMERLWR ALMYIKDVIR DKDILVQIWV PVHEEGRRVL  180
TTRDLPFALD DNSSKLARYR DISVKYQFSA EEDSKELVLG LPGRVFSGKV PEWTPDVRFF  240
RNDEYPRLIH AQQNDVRGTL ALPIFELDSR TCLGVVEIVM TTQKIKYRPE LESVCKALEA  300
VDLKSSEVLS TQNVFNKYYQ AAIPEIQQVL RSACDTHRLP LAQTWVPCIY QGKEGCRHSD  360
ENYGQCVSTV DHACYALDPQ VQSFHEACSE HHLFRGQGVV GLAFMTNQPC FSADITSYTK  420
TEYPLSHHAR MFRLQAAVAI RLRSIHTGAA DFVLEFFLPV DCKDPEEQKK MLTSLSLIIQ  480
QCCQSLRVIT DKELEEESGS RVDEVVVPSN PRPARNTCFT EAPQNDTDLS LFPEEKKPRE  540
ISDGRLSKLS DNQRDSILKP SVDCVEECST VGEGSFSSVG VGKTGERRRT KAEKTITLQV  600
LRQYFAGSLK DAAKSIGVCS TTLKRICRQH GIKRWPSRKI KKVGHSLQKL QLVIDSVQGA  660
SGAFQIDSFY TNFPELASPN VSGTSPFSTS KPNDHPMPSN MQPGDGGIFS VQAATAAATS  720
KSSSSCSQSS SSSHCCSSRS QLHPQTWNNV TSSDDLIAGE SSGGGDDVVL KRVRSEAGLN  780
ACSEDGRKLL PRSQSHKSLM EHHKTEKWFP PSSAKNNNNG ARIPQQQGEF QKVKVTYGED  840
RTRFRMQNNW GFIDLQQEVG RRFGIQDMVK FTLKYLDDDS EWVLLTCDAD LEECFEVYRS  900
SQNATIKLSL QPSRHLYRGC LRGNDPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein