PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00510.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family bHLH
Protein Properties Length: 250aa    MW: 27729.3 Da    PI: 8.2184
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.42.5e-1378124354
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++h+e+E+rRR+riNs +++Lr+llP +      K +Ka+ L k+v+ +k+L
  POO00510.1  78 KNHKEAEKRRRERINSHLDKLRSLLPCN-----SKTDKASLLAKVVQRVKEL 124
                 58*************************8.....7************999988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MQPENPDLYR FLADNGLINV VGPYNFPASG GGSVDHQFSA MQSFCSSSSY YPYSKASAGT  60
CSDSNTTSPH DRALAALKNH KEAEKRRRER INSHLDKLRS LLPCNSKTDK ASLLAKVVQR  120
VKELKEQTSE LTELESFPSE TDEITVLSSG DYSSGSNGQL IFKASLCCED RSDLIPDLIE  180
ILKSLHLKTL KVEMATLGGR IRNVLVVAAD NEHSIESVHF LQNALKSLLE RSNSSERSKR  240
RRGLDRKIVI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41130.17e-72bHLH family protein