PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

POO00329.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

NAC

Protein Properties

Length: 392aa MW: 44706.9 Da PI: 6.3746

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
POO00329.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	183	7e-57	20	149	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 lppGfrFhPtdee++++yL++kv ++++++ ++i e+d++k+ePwdLpk++k +ekewyfF++rd+ky+tg r+nrat+sgyWkatgkdke+++ ++ POO00329.1 20 LPPGFRFHPTDEEIITYYLTEKVMNSNFTA-SAIGEADLNKCEPWDLPKRAKMGEKEWYFFCQRDRKYPTGMRTNRATESGYWKATGKDKEIYKGnkGS 117 79***********************999.88***********99999************************************974455 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrle 129 lvg+kktLvfy+grapkgekt+Wvmheyrle POO00329.1 118 CLVGMKKTLVFYRGRAPKGEKTNWVMHEYRLE 149 56**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MEEACIVVNK GSEDRDLIDL PPGFRFHPTD EEIITYYLTE KVMNSNFTAS AIGEADLNKC 60 EPWDLPKRAK MGEKEWYFFC QRDRKYPTGM RTNRATESGY WKATGKDKEI YKGNKGSCLV 120 GMKKTLVFYR GRAPKGEKTN WVMHEYRLEG KFSYYNLPKS AKDEWVVCRV FHKNLGINKK 180 IAPNIPHGLL RINSLGVDDM LDCSNSLPPL TEDPPYNPNY RNDDDFKETT TISASSEGAT 240 HHHLNYYPQQ NPKIHHQNPI NNLYPQMIPI IPNSSYNNYF PGNSSLGYLQ QGKVSSLIPN 300 NLQMDHCFGS SNDRQCKVEQ FSNNRSNQSM VSVSQDTGLS TDMNNTTEIS SVVSEQADMG 360 RPSYDHQGFD QPHPSSSVGP MSEFDQVFWD DL

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MEEACIVVNK GSEDRDLIDL PPGFRFHPTD EEIITYYLTE KVMNSNFTAS AIGEADLNKC  60
EPWDLPKRAK MGEKEWYFFC QRDRKYPTGM RTNRATESGY WKATGKDKEI YKGNKGSCLV  120
GMKKTLVFYR GRAPKGEKTN WVMHEYRLEG KFSYYNLPKS AKDEWVVCRV FHKNLGINKK  180
IAPNIPHGLL RINSLGVDDM LDCSNSLPPL TEDPPYNPNY RNDDDFKETT TISASSEGAT  240
HHHLNYYPQQ NPKIHHQNPI NNLYPQMIPI IPNSSYNNYF PGNSSLGYLQ QGKVSSLIPN  300
NLQMDHCFGS SNDRQCKVEQ FSNNRSNQSM VSVSQDTGLS TDMNNTTEIS SVVSEQADMG  360
RPSYDHQGFD QPHPSSSVGP MSEFDQVFWD DL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.1	1e-114	NAC family protein