PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00227.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 529aa    MW: 58355.1 Da    PI: 5.4364
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00227.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H220.99.5e-07275296223
                 EETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                  C +Cgk F+r  nL+ H+r H
  POO00227.1 275 FCAICGKGFKRDANLRMHMRGH 296
                 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 529 aa     Download sequence    
MDLEEELCAG EWANSSSGSE LTKELSSDHP SYSDFNSQQC QQKWDNASMI GFGIGIETSF  60
QGYDRPSVVQ GGVPLNLNNQ AKILGQEDVQ MHDTQQTNKI PDWDPNAMLN NLSFLEEKIH  120
QLQDLVQLIA GRRGQVLGQP DELVFQQQQL VTADLTSIIA QLISTAGSLL PSVKNTLPAV  180
VPSMGHLGQP GRVNLAPGLG MNDDVQPQKN GGSKTSEESN QTDMTGNYVA EHNNLLDEHE  240
LKDEEDADEG ENLPPGTYEI LQLEKEEILA PHTHFCAICG KGFKRDANLR MHMRGHGDEY  300
KTPAALAKPH KDPGSEPVVI KRYSCPYAGC KRNKDHKKFQ PLKTILCVKN HYKRTHCDKS  360
YTCSRCNIKK FSVIADLKTH EKHCGKDKWL CSCGTTFSRK DKLFGHIALF QGHTPAIPFD  420
EARGNVGPAD HPTEIEATNK GSVNSVNFNF RSTTPGEAAA QDIMDLNGGL DDPTACFSPL  480
NFENCNFGGF HEFPRPPFED SESSFSFLLS GSCSYPPKTR GESSSNNLE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34370.21e-173C2H2 family protein