PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | POO00032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 317aa MW: 35864.6 Da PI: 4.4439 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 57.7 | 1.9e-18 | 85 | 138 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++++q++ Le+ Fe ++++ +++ +LAk+lgL+ rqV +WFqNrRa++k POO00032.1 85 KKRRLSTTQVQFLEKNFELENKLEPDRKLQLAKELGLQPRQVAIWFQNRRARYK 138 556899***********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 125.2 | 2.9e-40 | 85 | 176 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 kkrrls+ qv++LE++Fe e+kLep+rK +la+eLglqprqva+WFqnrRAR+ktkqlEk+y++Lk+++d+lk++ ++L ke e+L++e+++ POO00032.1 85 KKRRLSTTQVQFLEKNFELENKLEPDRKLQLAKELGLQPRQVAIWFQNRRARYKTKQLEKEYDSLKASFDRLKSDYDNLLKESETLKNEVNS 176 9**************************************************************************************99975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 317 aa Download sequence |
MASGKVYGGS NMTILLQEER LPSNSEVLKS LWIPSSSSSF QGSKSMVSFE NGGKGDSTDG 60 SFFEQLDKDE NGDDDYDGCF HQPGKKRRLS TTQVQFLEKN FELENKLEPD RKLQLAKELG 120 LQPRQVAIWF QNRRARYKTK QLEKEYDSLK ASFDRLKSDY DNLLKESETL KNEVNSLKEK 180 LVIKEKGSKE NLENAEPENP TLKTVSETVS NVVMGVCKQE DASSAKSDVF DSDSPHYAEN 240 YCSMLEPADS SHVFEPADHS DFSQDEDDTN NLMSQSLFPP PLPCFPKLEA CYYDGTPASS 300 CNFGFQVEDQ SFNFWPY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 133 | 141 | RRARYKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 6e-34 | HD-ZIP family protein |