PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID POO00032.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family HD-ZIP
Protein Properties Length: 317aa    MW: 35864.6 Da    PI: 4.4439
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
POO00032.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.71.9e-1885138356
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
    Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                 k+++++++q++ Le+ Fe ++++  +++ +LAk+lgL+ rqV +WFqNrRa++k
  POO00032.1  85 KKRRLSTTQVQFLEKNFELENKLEPDRKLQLAKELGLQPRQVAIWFQNRRARYK 138
                 556899***********************************************9 PP

2HD-ZIP_I/II125.22.9e-4085176293
  HD-ZIP_I/II   2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 
                  kkrrls+ qv++LE++Fe e+kLep+rK +la+eLglqprqva+WFqnrRAR+ktkqlEk+y++Lk+++d+lk++ ++L ke e+L++e+++
   POO00032.1  85 KKRRLSTTQVQFLEKNFELENKLEPDRKLQLAKELGLQPRQVAIWFQNRRARYKTKQLEKEYDSLKASFDRLKSDYDNLLKESETLKNEVNS 176
                  9**************************************************************************************99975 PP

Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MASGKVYGGS NMTILLQEER LPSNSEVLKS LWIPSSSSSF QGSKSMVSFE NGGKGDSTDG  60
SFFEQLDKDE NGDDDYDGCF HQPGKKRRLS TTQVQFLEKN FELENKLEPD RKLQLAKELG  120
LQPRQVAIWF QNRRARYKTK QLEKEYDSLK ASFDRLKSDY DNLLKESETL KNEVNSLKEK  180
LVIKEKGSKE NLENAEPENP TLKTVSETVS NVVMGVCKQE DASSAKSDVF DSDSPHYAEN  240
YCSMLEPADS SHVFEPADHS DFSQDEDDTN NLMSQSLFPP PLPCFPKLEA CYYDGTPASS  300
CNFGFQVEDQ SFNFWPY
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133141RRARYKTKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.16e-34HD-ZIP family protein