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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | PON99981.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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| Family | HD-ZIP | ||||||||
| Protein Properties | Length: 303aa MW: 34545.3 Da PI: 6.8756 | ||||||||
| Description | HD-ZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | Homeobox | 55.9 | 7e-18 | 84 | 137 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k+++++ eq+++Le+ Fe +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k
PON99981.1 84 KKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWK 137
456899***********************************************9 PP
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| 2 | HD-ZIP_I/II | 128.2 | 3.5e-41 | 83 | 173 | 1 | 91 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
ekkrrl+ eqvk+LE++Fe +kLeperK++lar+Lglqprq+a+WFqnrRAR+ktkqlEkdy+ Lkr+++a+k++n+ L++++++L++e+
PON99981.1 83 EKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNDILRAQNQKLQAEI 173
69**************************************************************************************987 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 303 aa Download sequence |
MTGNGMAFFP TNFMLQTPNE EDHHHHPPTS LNPINLTPCT PQDFHGVASF LGKRSVSFSG 60 IELGEDGNGG EDDLSDDGSQ AGEKKRRLNM EQVKTLEKNF ELGNKLEPER KMQLARALGL 120 QPRQIAIWFQ NRRARWKTKQ LEKDYDLLKR QFEAIKADND ILRAQNQKLQ AEILAMKNRE 180 PTESINLNKE TDQGSCSNRS DNSSDIKLDI SRTPAAIDST LSSHPRPLFP SSLRPNSGHH 240 VAQLFQGSSS ARSSDQQLQY QKHDHHHHQQ HHHVVKEESL SNMFCAIDDQ SGFWPWLEQQ 300 HFN |
| Nucleic Localization Signal ? help Back to Top | |||
|---|---|---|---|
| No. | Start | End | Sequence |
| 1 | 132 | 140 | RRARWKTKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT1G69780.1 | 1e-115 | HD-ZIP family protein | ||||
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for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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