PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON99900.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family DBB
Protein Properties Length: 208aa    MW: 23240.2 Da    PI: 5.1014
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON99900.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box22.42.5e-07433534
    zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeH 34
                 C+ +e+  ++lfC  ++  lC +C ++ H
  PON99900.1  4 LCDVCEKAAAILFCAADEAALCTSCDQKVH 33
                7******99******************998 PP
2zf-B_box29.51.5e-095292238
    zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg....Ht 38
                + ++C+ +e+ ++ ++Ce++++ lC +C +  H g    H+
  PON99900.1 52 DVPRCDICESGPAFFYCETDGSSLCLQCDMIVHVGgkrtHR 92
                5799******99******************99966666776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    
MRTLCDVCEK AAAILFCAAD EAALCTSCDQ KVHMCNKLAS RHVRVGLADP SDVPRCDICE  60
SGPAFFYCET DGSSLCLQCD MIVHVGGKRT HRRYLLLRQR IEFPGDKSVH FEELGLQPLD  120
PNEARREQSQ PPKLNQQNHS LSPVPVLENN IDGDAKMDNK LIDLNTQPHR MDGQPSTNQE  180
QDMDVFSGTD NQSTSVVPLV SFQREPEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G21320.13e-77DBB family protein