PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON99396.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

WRKY

Protein Properties

Length: 497aa MW: 54609.2 Da PI: 6.1061

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON99396.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	78.3	8.4e-25	187	243	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +DgynWrKYGqK+vk+ + +rsYY+Ct+++C++kk +e++++ ++v+ei+Y++eH+h+ PON99396.1 187 SDGYNWRKYGQKQVKSPKGSRSYYKCTYSECCAKK-IECCDHSGHVTEIVYKSEHTHD 243 7******************************98.*******************7 PP
2	WRKY	95.3	4.1e-30	359	416	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+vkg+++pr+YYrCtsagCpv+k++e + ++ ++v+itY+g H+h+ PON99396.1 359 ADGHRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNSNAVIITYKGVHDHD 416 6********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 497 aa Download sequence
MAAEHESSEA LESQNLKTNE EEEEEEEGEE EEDCDDEAGV GEFQRGEFRS SDPKSGAEPK 60 ELQLETLAAP DSGLQVNSTS KSNDGAQTQG QTAINHEEVL TDTRVQNPDA PRENQHQSTA 120 CQTSPELSPT SVTQSISSAP SPTFLEQRLS PPKDNGLCKP EADQQNSSDI ITVSPVPSMK 180 NLKIPASDGY NWRKYGQKQV KSPKGSRSYY KCTYSECCAK KIECCDHSGH VTEIVYKSEH 240 THDPPKRSNS TKENKLPSVE RFSGSTVTKQ PSKVPRDSDP SASAKESIHE TTPCSERKRQ 300 SLMNSDENGD VKVKEEHNNE PEPKKRLKKN QLEYSGSLLK PSKKPKFVVH AAGDVGISAD 360 GHRWRKYGQK MVKGNPHPRN YYRCTSAGCP VRKHIESAVD NSNAVIITYK GVHDHDMPVP 420 KKRHGPPSAP LVAAAAPASM NNLQSKKSET TQNQITSTQW SVDNEGELTG EALDLGGEKA 480 MESARTLLSI GFEIKPC

Sequence ? help Back to Top

Protein Sequence Length: 497 aa Download sequence

MAAEHESSEA LESQNLKTNE EEEEEEEGEE EEDCDDEAGV GEFQRGEFRS SDPKSGAEPK  60
ELQLETLAAP DSGLQVNSTS KSNDGAQTQG QTAINHEEVL TDTRVQNPDA PRENQHQSTA  120
CQTSPELSPT SVTQSISSAP SPTFLEQRLS PPKDNGLCKP EADQQNSSDI ITVSPVPSMK  180
NLKIPASDGY NWRKYGQKQV KSPKGSRSYY KCTYSECCAK KIECCDHSGH VTEIVYKSEH  240
THDPPKRSNS TKENKLPSVE RFSGSTVTKQ PSKVPRDSDP SASAKESIHE TTPCSERKRQ  300
SLMNSDENGD VKVKEEHNNE PEPKKRLKKN QLEYSGSLLK PSKKPKFVVH AAGDVGISAD  360
GHRWRKYGQK MVKGNPHPRN YYRCTSAGCP VRKHIESAVD NSNAVIITYK GVHDHDMPVP  420
KKRHGPPSAP LVAAAAPASM NNLQSKKSET TQNQITSTQW SVDNEGELTG EALDLGGEKA  480
MESARTLLSI GFEIKPC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G30935.1	1e-117	WRKY family protein