PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON99169.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | Dof | ||||||||
Protein Properties | Length: 240aa MW: 24902.4 Da PI: 7.339 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 123.2 | 8.6e-39 | 26 | 85 | 3 | 62 |
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++ l+cprCdstntkfCyynny+lsqPr+fCkaCrryWt+GG+lr+vPvGgg+rkn k+s PON99169.1 26 TEPLPCPRCDSTNTKFCYYNNYNLSQPRHFCKACRRYWTQGGTLRDVPVGGGSRKNSKRS 85 57899***************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 240 aa Download sequence |
MPSESGDRRA VARAQQSMGH PPPVQTEPLP CPRCDSTNTK FCYYNNYNLS QPRHFCKACR 60 RYWTQGGTLR DVPVGGGSRK NSKRSRSSNS SSSSSSSSSS MTHDPLLPSK PVSDSPVMIA 120 QPESVSEEHV NMNEGGGGGG GGGFTSLLNS QAPGGFLALG GFGLGLGNGF EEMGFGYGRG 180 VWPFPEVGDF GNGSNSGGGS GATSGCNTWQ QMSGSDGGLV DGDCFAWPDL AISMPGKGLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G50410.1 | 4e-40 | Dof family protein |