PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON99058.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family ERF
Protein Properties Length: 442aa    MW: 48732.5 Da    PI: 7.1562
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON99058.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.21.8e-1762111255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  PON99058.1  62 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 111
                 59*******.**********93....35999**********************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    
MEEAFTRLNG GPIQSSEVDP PHHHIDHPKK YTNTTSNKRS LRETGGPAVG GGGGAGVGGT  60
MRYRGVRRRP WGRYAAEIRD PQSKERRWLG TFDTAEEAAC AYDCAARAMR GLKARTNFVY  120
PSSPPHVADN HHHHLHHHHH QLLPPFNFNK QSQPSIKSQL ITPTPHQYSS NSWSRFSQYP  180
SPPPHPHPNA DFSGTTLSQK KGNSTTTTTG SPMNMHLFLR DFNPSSNMVP SSQTLYNQFP  240
QNTSLPGYPL LNSEISSYGL MTSSLSTNST TTTSLPLIDS NSKATSTTTT TTQVTDHDLE  300
SFFPSEESDS GLLEEVIQRF FPKSSSSSQK YPNHESSSGD YTNIYDPVMS SENMSTIQTG  360
SKNGNMGSCS FDYQTPINVP HGSFNGLNNT TTTAVSQTVP FGNHDVLAMN FHQLGQDQSM  420
LLDDIFQFPE FVNAFAARIQ NA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.12e-14ERF family protein