PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PON98999.1

Organism

Trema orientale

Taxonomic ID

63057

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema

Family

TALE

Protein Properties

Length: 337aa MW: 38532 Da PI: 5.185

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PON98999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.3e-09	280	314	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+ +gL+++q+ +WF N+R ++ PON98999.1 280 KWPYPTEADKNALAETTGLDQKQINNWFINQRKRH 314 669*****************************885 PP
2	ELK	26.7	1.3e-09	234	255	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 +LK++Llr +++++g+Lk EFs PON98999.1 234 DLKDRLLRRFGSHIGTLKLEFS 255 69*******************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MDEMYGLQAT TAVEYSDKAL MSPENLILPS DYQTLISSAA VGFRDHQYHN HRLIFGSDDH 60 QDHHELLSAA SAAISEAASI TPEFQREEDV SNLIKAKIAS HPTYPRLLQA YIDCQKVGAP 120 PEIASFLEEI RRKNELYKRD SIISTCLGAD PELDEFMETY CDMLVKYKSD LARPFDEATT 180 FLNKIEVQLS NLCTTGATHT RGLSDEGAAS SDEEFSGGEV EGQQESQLRG EDRDLKDRLL 240 RRFGSHIGTL KLEFSKKKKK GKLPREARQT LLDWWNLHYK WPYPTEADKN ALAETTGLDQ 300 KQINNWFINQ RKRHWKPSEN MQFAVMDNLS GQFYRDD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-130	TALE family protein