PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PON98987.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
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Family | YABBY | ||||||||
Protein Properties | Length: 199aa MW: 22131 Da PI: 5.0949 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 215.6 | 1.5e-66 | 6 | 165 | 2 | 168 |
YABBY 2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssek 100 ++f+ seq+CyvqC+fC+til+vsvP +s+++vvtvrCGhCt llsvn++kas + hl sl ++ ++e+++s +++ ++a++++ss PON98987.1 6 QIFDLSEQICYVQCGFCTTILLVSVPCSSMSMVVTVRCGHCTGLLSVNMMKASFVP---LHLLASLGQNHE-----QKEEVDSEEMEPQNAMETRSSVV 96 7899********************************************99988542...233333333333.....33334444444444444444444 PP YABBY 101 lsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihf 168 s+ ed ++ + v++PPekrqr+Psaynrfi+eei+r+ka+nP+++h+eafsaaaknWahfP+ + PON98987.1 97 SSDTEDGDSISLDQiVNKPPEKRQRAPSAYNRFIREEIKRLKAENPNMAHKEAFSAAAKNWAHFPPTQY 165 4444554544455559*************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 199 aa Download sequence |
MSALNQIFDL SEQICYVQCG FCTTILLVSV PCSSMSMVVT VRCGHCTGLL SVNMMKASFV 60 PLHLLASLGQ NHEQKEEVDS EEMEPQNAME TRSSVVSSDT EDGDSISLDQ IVNKPPEKRQ 120 RAPSAYNRFI REEIKRLKAE NPNMAHKEAF SAAAKNWAHF PPTQYKGGED QSCNQRDENV 180 TCDSDVNKVK TRIGNLEAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G23420.1 | 8e-61 | YABBY family protein |