PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PON98705.1
Organism
Trema orientale
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Cannabaceae; Trema
Family C2H2
Protein Properties Length: 220aa    MW: 24399.2 Da    PI: 6.5991
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PON98705.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H2163.4e-053860123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C++C++ F++   L  H++ H
  PON98705.1 38 YECTYCKRGFTNAQALGGHMNIH 60
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MESEKQGLSS ENSSSSEEND HRSEGQVVNE SGGAKRSYEC TYCKRGFTNA QALGGHMNIH  60
RKDRAKAKQH SSASHIHSHH HHELAEIAVA ASPFTTPFPS QSTAAWSMYQ PPSSVAETHQ  120
RNYNNMYFHQ PSAYGGTNFG NSSTYYGSDY CNHEFGSRSS SVTDHSLTMN EELLGANLSL  180
RMSSTSSSHL DDYEARRGSL MRHNSTDEVD LELRLGHGHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.13e-15C2H2 family protein